Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17990

Experiment: HBM-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HBM-Glucose
3,396,838	+	mltF	LU632_RS17980	0.72	-0.2
3,396,839	-	mltF	LU632_RS17980	0.72	-0.7
3,396,895	-	mltF	LU632_RS17980	0.76	-2.6
3,396,933	-	mltF	LU632_RS17980	0.79	+0.6
3,396,933	-	mltF	LU632_RS17980	0.79	-0.1
3,396,934	+	mltF	LU632_RS17980	0.79	+0.2
3,396,934	+	mltF	LU632_RS17980	0.79	+1.0
3,396,937	+	mltF	LU632_RS17980	0.79	+0.3
3,396,938	-	mltF	LU632_RS17980	0.79	+0.2
3,396,944	+	mltF	LU632_RS17980	0.79	-1.4
3,396,944	+	mltF	LU632_RS17980	0.79	-1.4
3,396,945	-	mltF	LU632_RS17980	0.80	-0.8
3,396,953	-	mltF	LU632_RS17980	0.80	+0.2
3,397,016	-	mltF	LU632_RS17980	0.84	-2.0
3,397,052	+	mltF	LU632_RS17980	0.87	+0.1
3,397,053	-	mltF	LU632_RS17980	0.87	-1.0
3,397,068	-	mltF	LU632_RS17980	0.88	-0.3
3,397,094	+	mltF	LU632_RS17980	0.90	-0.4
3,397,100	-				-0.2
3,397,101	-				+0.2
3,397,101	-				+0.3
3,397,101	-				-0.1
3,397,117	+				-0.2
3,397,121	+				+0.5
3,397,122	-				-0.3
3,397,122	-				+0.3
3,397,238	-				+0.0
3,397,255	+				-0.1
3,397,256	-				+0.1
3,397,256	-				+0.2
3,397,796	+				-0.6
3,397,797	-				-0.2
3,397,897	-	yfhb	LU632_RS17990	0.14	-0.0
3,397,914	-	yfhb	LU632_RS17990	0.16	+0.3
3,398,036	-	yfhb	LU632_RS17990	0.35	+0.2
3,398,052	+	yfhb	LU632_RS17990	0.37	+0.2
3,398,052	+	yfhb	LU632_RS17990	0.37	+1.0
3,398,145	-	yfhb	LU632_RS17990	0.51	+1.0
3,398,279	+	yfhb	LU632_RS17990	0.71	+0.0
3,398,356	-	yfhb	LU632_RS17990	0.82	-0.6
3,398,377	+	yfhb	LU632_RS17990	0.86	-0.4
3,398,447	+				-0.6
3,398,447	+				-0.0
3,398,448	-				+0.4
3,398,448	-				-0.4
3,398,465	-				-1.0
3,398,465	-				-0.1
3,398,546	+				+0.5
3,398,547	-				+0.7
3,398,551	+				+0.5
3,398,552	-				+0.2
3,398,595	+				-0.1
3,398,595	+				-0.0
3,398,595	+				+0.4
3,398,596	-				+0.0
3,398,601	+				+0.8
3,398,616	-				+0.0
3,398,683	+				+0.3
3,398,720	+				+0.3
3,398,770	-				-0.1
3,398,879	+	murQ	LU632_RS17995	0.22	+0.2
3,398,879	+	murQ	LU632_RS17995	0.22	-0.2
3,398,880	-	murQ	LU632_RS17995	0.22	-0.3
3,398,880	-	murQ	LU632_RS17995	0.22	+0.7
3,398,880	-	murQ	LU632_RS17995	0.22	-0.4
3,398,880	-	murQ	LU632_RS17995	0.22	-0.3
3,398,917	+	murQ	LU632_RS17995	0.26	+0.1
3,398,957	+	murQ	LU632_RS17995	0.31	-0.4
3,398,958	-	murQ	LU632_RS17995	0.31	-0.0
3,398,958	-	murQ	LU632_RS17995	0.31	+0.6
3,399,139	+	murQ	LU632_RS17995	0.51	+0.6
3,399,140	-	murQ	LU632_RS17995	0.51	+0.3
3,399,140	-	murQ	LU632_RS17995	0.51	-1.4
3,399,140	-	murQ	LU632_RS17995	0.51	-1.2
3,399,255	-	murQ	LU632_RS17995	0.64	-0.0
3,399,317	+	murQ	LU632_RS17995	0.71	-0.6
3,399,318	-	murQ	LU632_RS17995	0.71	+0.9
3,399,318	-	murQ	LU632_RS17995	0.71	+0.0
3,399,343	-	murQ	LU632_RS17995	0.74	+0.1