Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12985

Experiment: HBM-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HBM-Glucose
2,475,611	-	ansA	LU632_RS12975	0.72	+0.7
2,475,645	+	ansA	LU632_RS12975	0.76	-0.2
2,475,672	+	ansA	LU632_RS12975	0.78	-0.1
2,475,676	+	ansA	LU632_RS12975	0.79	-0.1
2,475,677	-	ansA	LU632_RS12975	0.79	+0.0
2,475,677	-	ansA	LU632_RS12975	0.79	-0.6
2,475,709	-	ansA	LU632_RS12975	0.82	+0.1
2,475,712	+	ansA	LU632_RS12975	0.82	+0.8
2,475,713	-	ansA	LU632_RS12975	0.82	-0.4
2,475,713	-	ansA	LU632_RS12975	0.82	-0.2
2,475,772	+	ansA	LU632_RS12975	0.88	+0.6
2,475,810	+				-2.6
2,475,813	+				+0.4
2,476,251	+	pncA	LU632_RS12980	0.56	+0.4
2,476,264	+	pncA	LU632_RS12980	0.58	-0.3
2,476,277	-	pncA	LU632_RS12980	0.60	-0.1
2,476,388	+	pncA	LU632_RS12980	0.78	-0.4
2,476,563	+		LU632_RS12985	0.14	+1.0
2,476,564	-		LU632_RS12985	0.14	+0.0
2,476,567	-		LU632_RS12985	0.15	-0.0
2,476,567	-		LU632_RS12985	0.15	+0.0
2,476,629	+		LU632_RS12985	0.37	-0.4
2,476,630	-		LU632_RS12985	0.38	-0.6
2,476,648	-		LU632_RS12985	0.44	+0.2
2,476,761	-		LU632_RS12985	0.85	-0.2
2,476,786	-				-0.2
2,476,803	+				+2.0
2,476,823	+				-0.6
2,476,823	+				-0.2
2,476,849	-				-0.2
2,476,862	+	msrB	LU632_RS12990	0.13	-0.6
2,476,863	-	msrB	LU632_RS12990	0.13	-1.3
2,476,863	-	msrB	LU632_RS12990	0.13	-0.5
2,476,865	+	msrB	LU632_RS12990	0.14	+0.1
2,476,865	+	msrB	LU632_RS12990	0.14	-0.8
2,476,865	+	msrB	LU632_RS12990	0.14	-0.4
2,476,866	-	msrB	LU632_RS12990	0.14	-0.2
2,476,866	-	msrB	LU632_RS12990	0.14	+0.1
2,477,011	+	msrB	LU632_RS12990	0.49	+0.2
2,477,041	+	msrB	LU632_RS12990	0.56	-0.2
2,477,042	-	msrB	LU632_RS12990	0.57	-0.3
2,477,042	-	msrB	LU632_RS12990	0.57	+0.4
2,477,089	+	msrB	LU632_RS12990	0.68	+0.0
2,477,090	-	msrB	LU632_RS12990	0.68	-0.2
2,477,090	-	msrB	LU632_RS12990	0.68	+0.7
2,477,090	-	msrB	LU632_RS12990	0.68	+0.4
2,477,121	-	msrB	LU632_RS12990	0.76	-0.4
2,477,121	-	msrB	LU632_RS12990	0.76	-0.3
2,477,161	+	msrB	LU632_RS12990	0.86	+1.1
2,477,162	-	msrB	LU632_RS12990	0.86	-0.6
2,477,253	-				-0.3
2,477,301	+				-0.5
2,477,375	+				-0.6
2,477,442	-				+0.3
2,477,475	-				-1.3
2,477,475	-				+0.4