Experiment: HBM-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS04735 and LU632_RS04740 are separated by 69 nucleotides LU632_RS04740 and LU632_RS04745 are separated by 52 nucleotides
LU632_RS04735: LU632_RS04735 - fimbria/pilus outer membrane usher protein, at 930,153 to 932,198
_RS04735
LU632_RS04740: LU632_RS04740 - DNA topoisomerase IV subunit B, at 932,268 to 932,570
_RS04740
LU632_RS04745: LU632_RS04745 - IS3 family transposase, at 932,623 to 933,792
_RS04745
Position (kb) 932
933 Strain fitness (log2 ratio) -2
-1
0
1
2 at 931.570 kb on - strand, within LU632_RS04735 at 931.579 kb on - strand, within LU632_RS04735 at 931.622 kb on + strand, within LU632_RS04735 at 931.704 kb on - strand, within LU632_RS04735 at 931.704 kb on - strand, within LU632_RS04735 at 931.704 kb on - strand, within LU632_RS04735 at 931.707 kb on + strand, within LU632_RS04735 at 931.708 kb on - strand, within LU632_RS04735 at 931.716 kb on - strand, within LU632_RS04735 at 931.743 kb on + strand, within LU632_RS04735 at 931.775 kb on + strand, within LU632_RS04735 at 931.775 kb on + strand, within LU632_RS04735 at 931.821 kb on + strand, within LU632_RS04735 at 931.821 kb on + strand, within LU632_RS04735 at 931.821 kb on + strand, within LU632_RS04735 at 931.821 kb on + strand, within LU632_RS04735 at 931.821 kb on + strand, within LU632_RS04735 at 931.821 kb on + strand, within LU632_RS04735 at 931.822 kb on - strand, within LU632_RS04735 at 931.822 kb on - strand, within LU632_RS04735 at 931.848 kb on - strand, within LU632_RS04735 at 931.906 kb on + strand, within LU632_RS04735 at 931.906 kb on + strand, within LU632_RS04735 at 931.906 kb on + strand, within LU632_RS04735 at 931.907 kb on - strand, within LU632_RS04735 at 931.995 kb on - strand at 932.312 kb on + strand, within LU632_RS04740 at 932.313 kb on - strand, within LU632_RS04740 at 932.555 kb on - strand at 932.578 kb on - strand at 932.578 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction HBM-Glucose remove 931,570 - LU632_RS04735 0.69 -0.7 931,579 - LU632_RS04735 0.70 -0.7 931,622 + LU632_RS04735 0.72 -0.3 931,704 - LU632_RS04735 0.76 -1.4 931,704 - LU632_RS04735 0.76 -0.0 931,704 - LU632_RS04735 0.76 -0.2 931,707 + LU632_RS04735 0.76 -2.1 931,708 - LU632_RS04735 0.76 +0.2 931,716 - LU632_RS04735 0.76 -1.1 931,743 + LU632_RS04735 0.78 -0.4 931,775 + LU632_RS04735 0.79 -0.6 931,775 + LU632_RS04735 0.79 -1.3 931,821 + LU632_RS04735 0.82 +2.0 931,821 + LU632_RS04735 0.82 -0.0 931,821 + LU632_RS04735 0.82 -0.0 931,821 + LU632_RS04735 0.82 +1.4 931,821 + LU632_RS04735 0.82 -0.3 931,821 + LU632_RS04735 0.82 +0.2 931,822 - LU632_RS04735 0.82 +1.1 931,822 - LU632_RS04735 0.82 -0.4 931,848 - LU632_RS04735 0.83 +0.4 931,906 + LU632_RS04735 0.86 +0.3 931,906 + LU632_RS04735 0.86 +1.0 931,906 + LU632_RS04735 0.86 +0.7 931,907 - LU632_RS04735 0.86 +0.0 931,995 - +0.0 932,312 + LU632_RS04740 0.15 -0.4 932,313 - LU632_RS04740 0.15 -0.3 932,555 - -0.0 932,578 - -0.2 932,578 - -0.7
Or see this region's nucleotide sequence