Experiment: HBM-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt tal and mog are separated by 111 nucleotides mog and LU632_RS02640 are separated by 226 nucleotides LU632_RS02640 and LU632_RS02645 are separated by 79 nucleotides
LU632_RS02630: tal - transaldolase, at 525,952 to 526,905
tal
LU632_RS02635: mog - molybdopterin adenylyltransferase, at 527,017 to 527,601
mog
LU632_RS02640: LU632_RS02640 - MFS transporter, at 527,828 to 529,147
_RS02640
LU632_RS02645: LU632_RS02645 - IS1 family transposase, at 529,227 to 529,924
_RS02645
Position (kb) 527
528
529
530 Strain fitness (log2 ratio) -1
0
1
2 at 526.907 kb on + strand at 526.911 kb on - strand at 526.937 kb on + strand at 526.937 kb on + strand at 526.938 kb on - strand at 526.958 kb on + strand at 526.963 kb on + strand at 526.968 kb on - strand at 526.969 kb on - strand at 527.027 kb on + strand at 527.028 kb on - strand at 527.033 kb on + strand at 527.034 kb on - strand at 527.075 kb on - strand at 527.470 kb on - strand, within mog at 527.502 kb on - strand, within mog at 527.502 kb on - strand, within mog at 527.502 kb on - strand, within mog at 527.538 kb on - strand, within mog at 527.595 kb on - strand at 527.615 kb on + strand at 527.616 kb on - strand at 527.621 kb on + strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.729 kb on + strand at 527.749 kb on - strand at 527.767 kb on + strand at 527.785 kb on + strand at 527.827 kb on + strand at 527.827 kb on + strand at 527.828 kb on - strand at 527.869 kb on + strand at 527.998 kb on - strand, within LU632_RS02640 at 527.998 kb on - strand, within LU632_RS02640 at 527.998 kb on - strand, within LU632_RS02640 at 528.026 kb on + strand, within LU632_RS02640 at 528.076 kb on + strand, within LU632_RS02640 at 528.108 kb on + strand, within LU632_RS02640 at 528.108 kb on + strand, within LU632_RS02640 at 528.202 kb on + strand, within LU632_RS02640 at 528.203 kb on - strand, within LU632_RS02640 at 528.281 kb on - strand, within LU632_RS02640 at 528.547 kb on + strand, within LU632_RS02640 at 528.568 kb on + strand, within LU632_RS02640 at 528.680 kb on - strand, within LU632_RS02640 at 528.680 kb on - strand, within LU632_RS02640 at 528.680 kb on - strand, within LU632_RS02640 at 528.680 kb on - strand, within LU632_RS02640 at 528.699 kb on + strand, within LU632_RS02640 at 528.761 kb on - strand, within LU632_RS02640 at 528.804 kb on - strand, within LU632_RS02640 at 528.891 kb on - strand, within LU632_RS02640 at 528.947 kb on + strand, within LU632_RS02640 at 528.947 kb on + strand, within LU632_RS02640 at 528.948 kb on - strand, within LU632_RS02640 at 528.948 kb on - strand, within LU632_RS02640 at 528.948 kb on - strand, within LU632_RS02640 at 528.949 kb on + strand, within LU632_RS02640 at 528.960 kb on - strand, within LU632_RS02640 at 528.989 kb on - strand, within LU632_RS02640 at 529.034 kb on + strand at 529.034 kb on + strand at 529.034 kb on + strand at 529.034 kb on + strand at 529.034 kb on + strand at 529.035 kb on - strand at 529.035 kb on - strand at 529.035 kb on - strand at 529.035 kb on - strand at 529.038 kb on + strand at 529.039 kb on - strand at 529.076 kb on + strand at 529.076 kb on + strand at 529.076 kb on + strand at 529.077 kb on - strand at 529.077 kb on - strand at 529.077 kb on - strand at 529.077 kb on - strand at 529.077 kb on - strand at 529.077 kb on - strand at 529.077 kb on - strand at 529.077 kb on - strand at 529.093 kb on + strand at 529.158 kb on - strand at 529.202 kb on - strand at 529.202 kb on - strand at 529.943 kb on + strand at 529.956 kb on + strand at 529.999 kb on + strand at 530.065 kb on - strand at 530.081 kb on + strand at 530.117 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction HBM-Glucose remove 526,907 + +0.4 526,911 - +0.4 526,937 + -0.8 526,937 + -0.5 526,938 - -0.3 526,958 + -0.7 526,963 + -0.1 526,968 - +0.5 526,969 - -0.6 527,027 + +0.2 527,028 - -0.1 527,033 + -0.0 527,034 - -0.7 527,075 - -0.8 527,470 - mog LU632_RS02635 0.77 -0.8 527,502 - mog LU632_RS02635 0.83 +0.1 527,502 - mog LU632_RS02635 0.83 +0.0 527,502 - mog LU632_RS02635 0.83 -1.4 527,538 - mog LU632_RS02635 0.89 -1.7 527,595 - +0.3 527,615 + +1.3 527,616 - +0.5 527,621 + +0.8 527,622 - +0.7 527,622 - -0.1 527,729 + -0.4 527,749 - +1.8 527,767 + -0.5 527,785 + +0.1 527,827 + +0.3 527,827 + +0.0 527,828 - -0.1 527,869 + -0.4 527,998 - LU632_RS02640 0.13 -0.4 527,998 - LU632_RS02640 0.13 +0.0 527,998 - LU632_RS02640 0.13 +0.3 528,026 + LU632_RS02640 0.15 -0.0 528,076 + LU632_RS02640 0.19 -0.8 528,108 + LU632_RS02640 0.21 -0.0 528,108 + LU632_RS02640 0.21 +0.4 528,202 + LU632_RS02640 0.28 +0.1 528,203 - LU632_RS02640 0.28 +0.1 528,281 - LU632_RS02640 0.34 +1.2 528,547 + LU632_RS02640 0.54 +0.0 528,568 + LU632_RS02640 0.56 -0.1 528,680 - LU632_RS02640 0.65 +0.9 528,680 - LU632_RS02640 0.65 +0.5 528,680 - LU632_RS02640 0.65 +0.8 528,680 - LU632_RS02640 0.65 +0.4 528,699 + LU632_RS02640 0.66 +0.1 528,761 - LU632_RS02640 0.71 -1.1 528,804 - LU632_RS02640 0.74 +0.2 528,891 - LU632_RS02640 0.81 +0.3 528,947 + LU632_RS02640 0.85 +0.0 528,947 + LU632_RS02640 0.85 +0.0 528,948 - LU632_RS02640 0.85 +0.7 528,948 - LU632_RS02640 0.85 +0.1 528,948 - LU632_RS02640 0.85 +0.7 528,949 + LU632_RS02640 0.85 +0.5 528,960 - LU632_RS02640 0.86 -0.2 528,989 - LU632_RS02640 0.88 -0.2 529,034 + -0.1 529,034 + -0.2 529,034 + -1.0 529,034 + -0.4 529,034 + -0.3 529,035 - +1.2 529,035 - -0.2 529,035 - +0.7 529,035 - +0.5 529,038 + +0.3 529,039 - +1.0 529,076 + +0.1 529,076 + -0.3 529,076 + -0.4 529,077 - +0.1 529,077 - +0.3 529,077 - -0.2 529,077 - -0.1 529,077 - -1.4 529,077 - +1.2 529,077 - -0.2 529,077 - -0.6 529,093 + +2.0 529,158 - +0.1 529,202 - +0.3 529,202 - +0.4 529,943 + +0.2 529,956 + -0.2 529,999 + +0.3 530,065 - -0.8 530,081 + -0.2 530,117 + +0.9
Or see this region's nucleotide sequence