Strain Fitness in Pseudomonas sp. RS175 around PFR28_04102

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
4,686,580	-		PFR28_04100	0.68	-0.6
4,686,648	-		PFR28_04100	0.76	-2.7
4,686,690	+		PFR28_04100	0.81	-0.6
4,686,690	+		PFR28_04100	0.81	-3.2
4,686,690	+		PFR28_04100	0.81	-2.3
4,686,690	+		PFR28_04100	0.81	+1.4
4,686,690	+		PFR28_04100	0.81	-1.7
4,686,690	+		PFR28_04100	0.81	-2.3
4,686,690	+		PFR28_04100	0.81	-1.4
4,686,690	+		PFR28_04100	0.81	-0.2
4,686,690	+		PFR28_04100	0.81	-0.2
4,686,690	+		PFR28_04100	0.81	+0.4
4,686,690	+		PFR28_04100	0.81	-1.2
4,686,690	+		PFR28_04100	0.81	-2.5
4,686,690	+		PFR28_04100	0.81	-0.6
4,686,690	+		PFR28_04100	0.81	+0.4
4,686,690	+		PFR28_04100	0.81	-0.9
4,686,691	-		PFR28_04100	0.81	+0.4
4,686,691	-		PFR28_04100	0.81	-2.2
4,686,691	-		PFR28_04100	0.81	-1.9
4,686,691	-		PFR28_04100	0.81	-0.2
4,686,691	-		PFR28_04100	0.81	-2.3
4,686,691	-		PFR28_04100	0.81	-0.9
4,686,691	-		PFR28_04100	0.81	-1.9
4,686,691	-		PFR28_04100	0.81	+0.4
4,686,691	-		PFR28_04100	0.81	-1.6
4,686,691	-		PFR28_04100	0.81	-0.6
4,686,691	-		PFR28_04100	0.81	-1.7
4,686,691	-		PFR28_04100	0.81	-0.3
4,686,691	-		PFR28_04100	0.81	-0.9
4,686,691	-		PFR28_04100	0.81	+0.4
4,686,691	-		PFR28_04100	0.81	-1.2
4,686,752	+		PFR28_04100	0.89	-0.4
4,686,753	-		PFR28_04100	0.89	-0.9
4,686,753	-		PFR28_04100	0.89	-0.6
4,686,983	+		PFR28_04101	0.20	-1.9
4,687,124	+		PFR28_04101	0.40	-1.2
4,687,617	+				-3.5
4,687,617	+				-2.2
4,687,617	+				-1.6
4,687,617	+				-1.4
4,687,617	+				-1.7
4,687,617	+				+1.4
4,687,618	-				-2.0
4,687,618	-				-1.0
4,687,618	-				+0.4
4,687,618	-				+0.4
4,687,618	-				+0.4
4,687,618	-				-2.3
4,687,618	-				+1.4
4,687,943	+		PFR28_04102	0.33	+1.4
4,687,943	+		PFR28_04102	0.33	-0.6
4,687,944	-		PFR28_04102	0.33	-1.4
4,687,944	-		PFR28_04102	0.33	-2.3
4,687,944	-		PFR28_04102	0.33	-0.9
4,687,944	-		PFR28_04102	0.33	-1.4
4,687,945	+		PFR28_04102	0.33	-1.6
4,687,945	+		PFR28_04102	0.33	-0.6
4,687,945	+		PFR28_04102	0.33	-1.6
4,687,945	+		PFR28_04102	0.33	-2.9
4,687,945	+		PFR28_04102	0.33	-0.6
4,687,945	+		PFR28_04102	0.33	-0.6
4,687,945	+		PFR28_04102	0.33	-2.5
4,687,945	+		PFR28_04102	0.33	-1.7
4,687,945	+		PFR28_04102	0.33	-1.9
4,687,945	+		PFR28_04102	0.33	-1.6
4,687,945	+		PFR28_04102	0.33	-2.3
4,687,945	+		PFR28_04102	0.33	-1.7
4,687,945	+		PFR28_04102	0.33	-0.6
4,687,945	+		PFR28_04102	0.33	-0.9
4,687,945	+		PFR28_04102	0.33	-1.4
4,687,945	+		PFR28_04102	0.33	-0.6
4,687,946	-		PFR28_04102	0.33	-0.7
4,687,946	-		PFR28_04102	0.33	+0.1
4,687,946	-		PFR28_04102	0.33	-0.4
4,687,946	-		PFR28_04102	0.33	-1.7
4,687,946	-		PFR28_04102	0.33	-2.0
4,687,946	-		PFR28_04102	0.33	-2.5
4,687,946	-		PFR28_04102	0.33	-2.9
4,687,946	-		PFR28_04102	0.33	+1.4
4,687,946	-		PFR28_04102	0.33	-0.9
4,687,946	-		PFR28_04102	0.33	-2.9
4,687,946	-		PFR28_04102	0.33	-1.2
4,687,946	-		PFR28_04102	0.33	+1.4
4,687,946	-		PFR28_04102	0.33	-0.2
4,687,946	-		PFR28_04102	0.33	-0.6
4,687,946	-		PFR28_04102	0.33	-0.4
4,687,946	-		PFR28_04102	0.33	-0.6
4,687,946	-		PFR28_04102	0.33	-0.6
4,687,946	-		PFR28_04102	0.33	-1.7
4,687,951	+		PFR28_04102	0.33	-0.9
4,687,951	+		PFR28_04102	0.33	+0.4
4,687,951	+		PFR28_04102	0.33	-3.2
4,687,952	-		PFR28_04102	0.34	-1.2
4,687,952	-		PFR28_04102	0.34	-0.6
4,688,019	-		PFR28_04102	0.39	-3.2
4,688,055	+		PFR28_04102	0.42	+1.4
4,688,055	+		PFR28_04102	0.42	+1.0
4,688,055	+		PFR28_04102	0.42	-2.7
4,688,055	+		PFR28_04102	0.42	-0.6
4,688,056	-		PFR28_04102	0.42	-2.7
4,688,056	-		PFR28_04102	0.42	-0.9
4,688,056	-		PFR28_04102	0.42	-2.7
4,688,214	+		PFR28_04102	0.56	-0.6
4,688,293	+		PFR28_04102	0.62	-1.2
4,688,293	+		PFR28_04102	0.62	-1.4
4,688,294	-		PFR28_04102	0.63	-2.0
4,688,416	+		PFR28_04102	0.73	-2.6
4,688,416	+		PFR28_04102	0.73	+0.4
4,688,416	+		PFR28_04102	0.73	-1.7
4,688,416	+		PFR28_04102	0.73	-1.7
4,688,416	+		PFR28_04102	0.73	-0.4
4,688,417	-		PFR28_04102	0.73	-2.0
4,688,417	-		PFR28_04102	0.73	+1.0
4,688,417	-		PFR28_04102	0.73	-1.7
4,688,529	+		PFR28_04102	0.82	-0.2
4,688,530	-		PFR28_04102	0.83	-1.4
4,688,530	-		PFR28_04102	0.83	-1.4
4,688,530	-		PFR28_04102	0.83	-1.7
4,688,532	-		PFR28_04102	0.83	-1.4
4,688,532	-		PFR28_04102	0.83	-1.2
4,688,596	+		PFR28_04102	0.88	-1.7
4,688,596	+		PFR28_04102	0.88	+0.1
4,688,596	+		PFR28_04102	0.88	+1.4
4,688,597	-		PFR28_04102	0.88	-2.4
4,688,597	-		PFR28_04102	0.88	-0.6
4,688,684	-				-1.4
4,688,684	-				-0.9
4,688,754	+				-2.9
4,688,754	+				-2.3
4,688,754	+				+0.1
4,688,755	-				-0.2
4,688,755	-				+0.2
4,688,755	-				+0.2
4,688,755	-				+0.2
4,688,899	-				-0.8
4,689,064	-		PFR28_04103	0.17	-1.6
4,689,384	+		PFR28_04103	0.48	-2.0
4,689,384	+		PFR28_04103	0.48	-2.3
4,689,385	-		PFR28_04103	0.48	-1.6
4,689,385	-		PFR28_04103	0.48	-1.2
4,689,411	+		PFR28_04103	0.50	+0.4
4,689,411	+		PFR28_04103	0.50	-1.7
4,689,412	-		PFR28_04103	0.50	+2.0
4,689,412	-		PFR28_04103	0.50	-0.2
4,689,412	-		PFR28_04103	0.50	+1.4
4,689,424	+		PFR28_04103	0.51	-1.4
4,689,424	+		PFR28_04103	0.51	+1.4
4,689,425	-		PFR28_04103	0.51	-1.7
4,689,430	+		PFR28_04103	0.52	-1.6
4,689,430	+		PFR28_04103	0.52	-0.9
4,689,431	-		PFR28_04103	0.52	-1.7
4,689,431	-		PFR28_04103	0.52	+0.4
4,689,431	-		PFR28_04103	0.52	-0.2
4,689,438	+		PFR28_04103	0.53	+0.4
4,689,438	+		PFR28_04103	0.53	-0.2
4,689,438	+		PFR28_04103	0.53	-0.9
4,689,439	-		PFR28_04103	0.53	-1.2
4,689,471	+		PFR28_04103	0.56	-0.9
4,689,471	+		PFR28_04103	0.56	-0.2
4,689,471	+		PFR28_04103	0.56	-0.6
4,689,471	+		PFR28_04103	0.56	+1.4
4,689,471	+		PFR28_04103	0.56	-1.6
4,689,471	+		PFR28_04103	0.56	-0.6
4,689,471	+		PFR28_04103	0.56	-2.0
4,689,471	+		PFR28_04103	0.56	-1.9
4,689,471	+		PFR28_04103	0.56	-0.6
4,689,471	+		PFR28_04103	0.56	-0.9
4,689,471	+		PFR28_04103	0.56	-1.4
4,689,471	+		PFR28_04103	0.56	-1.9
4,689,471	+		PFR28_04103	0.56	-1.2
4,689,472	-		PFR28_04103	0.56	-1.7
4,689,472	-		PFR28_04103	0.56	-2.0
4,689,472	-		PFR28_04103	0.56	-0.9
4,689,472	-		PFR28_04103	0.56	-1.2
4,689,472	-		PFR28_04103	0.56	-0.2
4,689,472	-		PFR28_04103	0.56	-0.2
4,689,472	-		PFR28_04103	0.56	+0.4
4,689,472	-		PFR28_04103	0.56	-0.6
4,689,472	-		PFR28_04103	0.56	-3.0
4,689,472	-		PFR28_04103	0.56	-1.2
4,689,474	+		PFR28_04103	0.56	-2.7
4,689,474	+		PFR28_04103	0.56	+0.4
4,689,474	+		PFR28_04103	0.56	-1.6
4,689,474	+		PFR28_04103	0.56	-0.6
4,689,474	+		PFR28_04103	0.56	-2.5
4,689,474	+		PFR28_04103	0.56	-2.4
4,689,475	-		PFR28_04103	0.56	-1.7
4,689,475	-		PFR28_04103	0.56	-2.5
4,689,585	+		PFR28_04103	0.67	+1.4
4,689,585	+		PFR28_04103	0.67	-0.2
4,689,585	+		PFR28_04103	0.67	+1.4
4,689,586	-		PFR28_04103	0.67	-1.6
4,689,586	-		PFR28_04103	0.67	-0.9
4,689,586	-		PFR28_04103	0.67	-1.4
4,689,723	+		PFR28_04103	0.80	-0.3
4,689,723	+		PFR28_04103	0.80	-0.9
4,689,724	-		PFR28_04103	0.80	-2.6
4,689,724	-		PFR28_04103	0.80	-3.0
4,689,724	-		PFR28_04103	0.80	-2.7
4,689,724	-		PFR28_04103	0.80	-2.5
4,689,724	-		PFR28_04103	0.80	-2.5
4,689,724	-		PFR28_04103	0.80	-2.5