Strain Fitness in Escherichia coli BL21 around ECD_02915

Experiment: Bas48

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02913 and ECD_02914 are separated by 373 nucleotidesECD_02914 and ECD_02915 are separated by 283 nucleotidesECD_02915 and ECD_02916 are separated by 95 nucleotides ECD_02913: ECD_02913 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 3,051,250 to 3,051,903 _02913 ECD_02914: ECD_02914 - BMFP family putative fusogenic protein, at 3,052,277 to 3,052,567 _02914 ECD_02915: ECD_02915 - putative fimbrial-like adhesin protein, at 3,052,851 to 3,053,402 _02915 ECD_02916: ECD_02916 - putative outer membrane usher protein, at 3,053,498 to 3,055,966 _02916 Position (kb) 3052 3053 3054Strain fitness (log2 ratio) -1 0 1 2 3at 3051.927 kb on - strandat 3051.953 kb on - strandat 3051.953 kb on - strandat 3051.967 kb on - strandat 3052.195 kb on + strandat 3052.196 kb on - strandat 3052.205 kb on + strandat 3052.216 kb on + strandat 3052.223 kb on + strandat 3052.223 kb on + strandat 3052.223 kb on + strandat 3052.237 kb on + strandat 3052.257 kb on - strandat 3052.273 kb on + strandat 3052.273 kb on + strandat 3052.274 kb on - strandat 3052.416 kb on + strand, within ECD_02914at 3052.416 kb on + strand, within ECD_02914at 3052.416 kb on + strand, within ECD_02914at 3052.614 kb on + strandat 3052.976 kb on + strand, within ECD_02915at 3053.112 kb on - strand, within ECD_02915at 3053.279 kb on + strand, within ECD_02915at 3053.327 kb on + strand, within ECD_02915at 3054.034 kb on + strand, within ECD_02916at 3054.199 kb on + strand, within ECD_02916

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas48
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3,051,927 - -0.2
3,051,953 - +0.4
3,051,953 - -0.2
3,051,967 - +1.7
3,052,195 + +1.1
3,052,196 - +0.8
3,052,205 + +3.1
3,052,216 + -0.8
3,052,223 + -0.3
3,052,223 + -1.3
3,052,223 + -1.2
3,052,237 + +1.7
3,052,257 - -1.1
3,052,273 + +0.3
3,052,273 + +0.0
3,052,274 - +1.1
3,052,416 + ECD_02914 0.48 +0.1
3,052,416 + ECD_02914 0.48 -1.7
3,052,416 + ECD_02914 0.48 -0.1
3,052,614 + +1.8
3,052,976 + ECD_02915 0.23 +2.1
3,053,112 - ECD_02915 0.47 +0.8
3,053,279 + ECD_02915 0.78 +1.2
3,053,327 + ECD_02915 0.86 +1.3
3,054,034 + ECD_02916 0.22 +0.7
3,054,199 + ECD_02916 0.28 -0.5

Or see this region's nucleotide sequence