Strain Fitness in Escherichia coli BL21 around ECD_02734

Experiment: Bas48

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02733 and ECD_02734 are separated by 56 nucleotidesECD_02734 and ECD_02735 are separated by 265 nucleotides ECD_02733: ECD_02733 - 6-phospho-beta-glucosidase A, at 2,874,522 to 2,875,961 _02733 ECD_02734: ECD_02734 - putative NAD(P)-dependent oxidoreductase, at 2,876,018 to 2,876,761 _02734 ECD_02735: ECD_02735 - glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex, at 2,877,027 to 2,879,900 _02735 Position (kb) 2876 2877Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2875.023 kb on + strand, within ECD_02733at 2875.023 kb on + strand, within ECD_02733at 2875.024 kb on - strand, within ECD_02733at 2875.041 kb on + strand, within ECD_02733at 2875.041 kb on + strand, within ECD_02733at 2875.041 kb on + strand, within ECD_02733at 2875.122 kb on + strand, within ECD_02733at 2875.122 kb on + strand, within ECD_02733at 2875.122 kb on + strand, within ECD_02733at 2875.122 kb on + strand, within ECD_02733at 2875.122 kb on + strand, within ECD_02733at 2875.122 kb on + strand, within ECD_02733at 2875.123 kb on - strand, within ECD_02733at 2875.123 kb on - strand, within ECD_02733at 2875.123 kb on - strand, within ECD_02733at 2875.155 kb on + strand, within ECD_02733at 2875.155 kb on + strand, within ECD_02733at 2875.155 kb on + strand, within ECD_02733at 2875.155 kb on + strand, within ECD_02733at 2875.155 kb on + strand, within ECD_02733at 2875.155 kb on + strand, within ECD_02733at 2875.155 kb on + strand, within ECD_02733at 2875.156 kb on - strand, within ECD_02733at 2875.156 kb on - strand, within ECD_02733at 2875.156 kb on - strand, within ECD_02733at 2875.156 kb on - strand, within ECD_02733at 2875.156 kb on - strand, within ECD_02733at 2875.156 kb on - strand, within ECD_02733at 2875.241 kb on + strand, within ECD_02733at 2875.241 kb on + strand, within ECD_02733at 2875.263 kb on + strand, within ECD_02733at 2875.269 kb on + strand, within ECD_02733at 2875.269 kb on + strand, within ECD_02733at 2875.323 kb on + strand, within ECD_02733at 2875.324 kb on - strand, within ECD_02733at 2875.353 kb on + strand, within ECD_02733at 2875.365 kb on + strand, within ECD_02733at 2875.366 kb on - strand, within ECD_02733at 2875.366 kb on - strand, within ECD_02733at 2875.397 kb on + strand, within ECD_02733at 2875.397 kb on + strand, within ECD_02733at 2875.397 kb on + strand, within ECD_02733at 2875.397 kb on + strand, within ECD_02733at 2875.429 kb on + strand, within ECD_02733at 2875.430 kb on - strand, within ECD_02733at 2875.467 kb on + strand, within ECD_02733at 2875.470 kb on + strand, within ECD_02733at 2875.470 kb on + strand, within ECD_02733at 2875.470 kb on + strand, within ECD_02733at 2875.470 kb on + strand, within ECD_02733at 2875.470 kb on + strand, within ECD_02733at 2875.471 kb on - strand, within ECD_02733at 2875.471 kb on - strand, within ECD_02733at 2875.548 kb on + strand, within ECD_02733at 2875.549 kb on - strand, within ECD_02733at 2875.553 kb on + strand, within ECD_02733at 2875.553 kb on + strand, within ECD_02733at 2875.554 kb on - strand, within ECD_02733at 2875.617 kb on + strand, within ECD_02733at 2875.618 kb on - strand, within ECD_02733at 2875.618 kb on - strand, within ECD_02733at 2875.618 kb on - strand, within ECD_02733at 2875.626 kb on + strand, within ECD_02733at 2875.643 kb on + strand, within ECD_02733at 2875.644 kb on - strand, within ECD_02733at 2875.668 kb on + strand, within ECD_02733at 2875.669 kb on - strand, within ECD_02733at 2875.719 kb on + strand, within ECD_02733at 2875.719 kb on + strand, within ECD_02733at 2875.720 kb on - strand, within ECD_02733at 2875.761 kb on + strand, within ECD_02733at 2875.761 kb on + strand, within ECD_02733at 2875.762 kb on - strand, within ECD_02733at 2875.762 kb on - strand, within ECD_02733at 2875.785 kb on + strand, within ECD_02733at 2875.786 kb on - strand, within ECD_02733at 2875.834 kb on - strandat 2875.853 kb on + strandat 2875.853 kb on + strandat 2875.853 kb on + strandat 2875.854 kb on - strandat 2875.854 kb on - strandat 2875.857 kb on + strandat 2875.857 kb on + strandat 2875.857 kb on + strandat 2875.857 kb on + strandat 2875.857 kb on + strandat 2875.857 kb on + strandat 2875.857 kb on + strandat 2875.858 kb on - strandat 2875.858 kb on - strandat 2875.858 kb on - strandat 2875.866 kb on - strandat 2875.889 kb on + strandat 2875.889 kb on + strandat 2875.889 kb on + strandat 2875.890 kb on - strandat 2875.904 kb on + strandat 2875.904 kb on + strandat 2875.904 kb on + strandat 2875.904 kb on + strandat 2875.916 kb on + strandat 2875.916 kb on + strandat 2875.916 kb on + strandat 2875.916 kb on + strandat 2875.916 kb on + strandat 2875.917 kb on - strandat 2875.917 kb on - strandat 2875.959 kb on + strandat 2875.959 kb on + strandat 2876.058 kb on + strandat 2876.059 kb on - strandat 2876.059 kb on - strandat 2876.059 kb on - strandat 2876.059 kb on - strandat 2876.059 kb on - strandat 2876.068 kb on + strandat 2876.075 kb on + strandat 2876.075 kb on + strandat 2876.075 kb on + strandat 2876.075 kb on + strandat 2876.075 kb on + strandat 2876.076 kb on - strandat 2876.076 kb on - strandat 2876.076 kb on - strandat 2876.193 kb on + strand, within ECD_02734at 2876.193 kb on + strand, within ECD_02734at 2876.194 kb on - strand, within ECD_02734at 2876.194 kb on - strand, within ECD_02734at 2876.194 kb on - strand, within ECD_02734at 2876.197 kb on + strand, within ECD_02734at 2876.198 kb on - strand, within ECD_02734at 2876.198 kb on - strand, within ECD_02734at 2876.198 kb on - strand, within ECD_02734at 2876.198 kb on - strand, within ECD_02734at 2876.198 kb on - strand, within ECD_02734at 2876.269 kb on + strand, within ECD_02734at 2876.269 kb on + strand, within ECD_02734at 2876.304 kb on + strand, within ECD_02734at 2876.304 kb on + strand, within ECD_02734at 2876.304 kb on + strand, within ECD_02734at 2876.305 kb on - strand, within ECD_02734at 2876.305 kb on - strand, within ECD_02734at 2876.305 kb on - strand, within ECD_02734at 2876.305 kb on - strand, within ECD_02734at 2876.305 kb on - strand, within ECD_02734at 2876.305 kb on - strand, within ECD_02734at 2876.305 kb on - strand, within ECD_02734at 2876.442 kb on - strand, within ECD_02734at 2876.625 kb on - strand, within ECD_02734at 2876.628 kb on - strand, within ECD_02734at 2876.668 kb on - strand, within ECD_02734at 2876.684 kb on - strand, within ECD_02734at 2876.686 kb on - strand, within ECD_02734at 2876.795 kb on - strandat 2876.795 kb on - strandat 2876.883 kb on + strandat 2876.884 kb on - strandat 2876.888 kb on - strandat 2877.011 kb on + strandat 2877.028 kb on + strandat 2877.028 kb on + strandat 2877.029 kb on - strandat 2877.029 kb on - strandat 2877.035 kb on - strandat 2877.041 kb on + strandat 2877.069 kb on - strandat 2877.079 kb on + strandat 2877.112 kb on + strandat 2877.113 kb on - strandat 2877.138 kb on + strandat 2877.139 kb on - strandat 2877.157 kb on + strandat 2877.158 kb on - strandat 2877.455 kb on + strand, within ECD_02735at 2877.456 kb on - strand, within ECD_02735at 2877.489 kb on - strand, within ECD_02735at 2877.490 kb on + strand, within ECD_02735at 2877.490 kb on + strand, within ECD_02735at 2877.490 kb on + strand, within ECD_02735at 2877.490 kb on + strand, within ECD_02735at 2877.490 kb on + strand, within ECD_02735at 2877.490 kb on + strand, within ECD_02735at 2877.490 kb on + strand, within ECD_02735at 2877.491 kb on - strand, within ECD_02735at 2877.491 kb on - strand, within ECD_02735at 2877.491 kb on - strand, within ECD_02735at 2877.491 kb on - strand, within ECD_02735at 2877.527 kb on + strand, within ECD_02735at 2877.528 kb on - strand, within ECD_02735at 2877.528 kb on - strand, within ECD_02735at 2877.528 kb on - strand, within ECD_02735at 2877.528 kb on - strand, within ECD_02735at 2877.529 kb on + strand, within ECD_02735at 2877.529 kb on + strand, within ECD_02735at 2877.529 kb on + strand, within ECD_02735at 2877.529 kb on + strand, within ECD_02735at 2877.529 kb on + strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.530 kb on - strand, within ECD_02735at 2877.595 kb on + strand, within ECD_02735at 2877.596 kb on - strand, within ECD_02735at 2877.596 kb on - strand, within ECD_02735at 2877.596 kb on - strand, within ECD_02735at 2877.596 kb on - strand, within ECD_02735at 2877.596 kb on - strand, within ECD_02735at 2877.596 kb on - strand, within ECD_02735at 2877.690 kb on - strand, within ECD_02735

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas48
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2,875,023 + ECD_02733 0.35 -0.0
2,875,023 + ECD_02733 0.35 +1.0
2,875,024 - ECD_02733 0.35 +0.6
2,875,041 + ECD_02733 0.36 -0.2
2,875,041 + ECD_02733 0.36 -0.7
2,875,041 + ECD_02733 0.36 +0.3
2,875,122 + ECD_02733 0.42 -0.8
2,875,122 + ECD_02733 0.42 -1.2
2,875,122 + ECD_02733 0.42 -1.0
2,875,122 + ECD_02733 0.42 +0.4
2,875,122 + ECD_02733 0.42 +0.0
2,875,122 + ECD_02733 0.42 -0.5
2,875,123 - ECD_02733 0.42 +1.0
2,875,123 - ECD_02733 0.42 -1.0
2,875,123 - ECD_02733 0.42 -0.3
2,875,155 + ECD_02733 0.44 +1.9
2,875,155 + ECD_02733 0.44 +1.0
2,875,155 + ECD_02733 0.44 +0.1
2,875,155 + ECD_02733 0.44 -3.3
2,875,155 + ECD_02733 0.44 +0.3
2,875,155 + ECD_02733 0.44 -0.4
2,875,155 + ECD_02733 0.44 -0.1
2,875,156 - ECD_02733 0.44 +0.3
2,875,156 - ECD_02733 0.44 +1.8
2,875,156 - ECD_02733 0.44 +0.9
2,875,156 - ECD_02733 0.44 -1.2
2,875,156 - ECD_02733 0.44 -1.0
2,875,156 - ECD_02733 0.44 +1.1
2,875,241 + ECD_02733 0.50 -0.3
2,875,241 + ECD_02733 0.50 +0.0
2,875,263 + ECD_02733 0.51 -1.2
2,875,269 + ECD_02733 0.52 +0.8
2,875,269 + ECD_02733 0.52 -1.1
2,875,323 + ECD_02733 0.56 +1.0
2,875,324 - ECD_02733 0.56 +0.0
2,875,353 + ECD_02733 0.58 +0.6
2,875,365 + ECD_02733 0.59 +0.7
2,875,366 - ECD_02733 0.59 -1.6
2,875,366 - ECD_02733 0.59 +2.1
2,875,397 + ECD_02733 0.61 -0.1
2,875,397 + ECD_02733 0.61 +0.3
2,875,397 + ECD_02733 0.61 -0.9
2,875,397 + ECD_02733 0.61 +1.0
2,875,429 + ECD_02733 0.63 +0.2
2,875,430 - ECD_02733 0.63 -0.7
2,875,467 + ECD_02733 0.66 -0.5
2,875,470 + ECD_02733 0.66 -0.2
2,875,470 + ECD_02733 0.66 +1.0
2,875,470 + ECD_02733 0.66 +0.8
2,875,470 + ECD_02733 0.66 +0.7
2,875,470 + ECD_02733 0.66 +1.6
2,875,471 - ECD_02733 0.66 -0.3
2,875,471 - ECD_02733 0.66 +0.9
2,875,548 + ECD_02733 0.71 -0.2
2,875,549 - ECD_02733 0.71 -0.9
2,875,553 + ECD_02733 0.72 -0.2
2,875,553 + ECD_02733 0.72 -1.2
2,875,554 - ECD_02733 0.72 +0.0
2,875,617 + ECD_02733 0.76 -0.2
2,875,618 - ECD_02733 0.76 +1.2
2,875,618 - ECD_02733 0.76 -1.6
2,875,618 - ECD_02733 0.76 -0.5
2,875,626 + ECD_02733 0.77 +0.7
2,875,643 + ECD_02733 0.78 +0.6
2,875,644 - ECD_02733 0.78 -0.6
2,875,668 + ECD_02733 0.80 +0.0
2,875,669 - ECD_02733 0.80 -1.0
2,875,719 + ECD_02733 0.83 -0.5
2,875,719 + ECD_02733 0.83 -0.6
2,875,720 - ECD_02733 0.83 +0.7
2,875,761 + ECD_02733 0.86 -0.4
2,875,761 + ECD_02733 0.86 +1.6
2,875,762 - ECD_02733 0.86 -1.1
2,875,762 - ECD_02733 0.86 +0.2
2,875,785 + ECD_02733 0.88 +1.7
2,875,786 - ECD_02733 0.88 -0.7
2,875,834 - +0.1
2,875,853 + -2.6
2,875,853 + +0.2
2,875,853 + -0.6
2,875,854 - +0.9
2,875,854 - -1.1
2,875,857 + +1.2
2,875,857 + +0.2
2,875,857 + -0.1
2,875,857 + -0.2
2,875,857 + +1.2
2,875,857 + -1.7
2,875,857 + +0.4
2,875,858 - +1.7
2,875,858 - -0.5
2,875,858 - -0.7
2,875,866 - -0.8
2,875,889 + -0.3
2,875,889 + +0.3
2,875,889 + +1.3
2,875,890 - -0.5
2,875,904 + -1.6
2,875,904 + -0.3
2,875,904 + -0.1
2,875,904 + +1.0
2,875,916 + +1.4
2,875,916 + -1.0
2,875,916 + -1.0
2,875,916 + +0.9
2,875,916 + +1.1
2,875,917 - -0.2
2,875,917 - +1.3
2,875,959 + +0.2
2,875,959 + +0.9
2,876,058 + +0.9
2,876,059 - +0.0
2,876,059 - -0.3
2,876,059 - +0.9
2,876,059 - +0.0
2,876,059 - -1.1
2,876,068 + +1.0
2,876,075 + -1.0
2,876,075 + +0.2
2,876,075 + +1.0
2,876,075 + +0.6
2,876,075 + +0.6
2,876,076 - +0.0
2,876,076 - +1.0
2,876,076 - +1.7
2,876,193 + ECD_02734 0.24 +0.9
2,876,193 + ECD_02734 0.24 +0.9
2,876,194 - ECD_02734 0.24 -0.4
2,876,194 - ECD_02734 0.24 -1.9
2,876,194 - ECD_02734 0.24 -0.2
2,876,197 + ECD_02734 0.24 +0.6
2,876,198 - ECD_02734 0.24 -0.1
2,876,198 - ECD_02734 0.24 -1.3
2,876,198 - ECD_02734 0.24 -0.6
2,876,198 - ECD_02734 0.24 +0.7
2,876,198 - ECD_02734 0.24 +1.1
2,876,269 + ECD_02734 0.34 -0.6
2,876,269 + ECD_02734 0.34 +0.6
2,876,304 + ECD_02734 0.38 +0.0
2,876,304 + ECD_02734 0.38 -0.5
2,876,304 + ECD_02734 0.38 -0.7
2,876,305 - ECD_02734 0.39 -0.7
2,876,305 - ECD_02734 0.39 -0.9
2,876,305 - ECD_02734 0.39 -1.2
2,876,305 - ECD_02734 0.39 +0.0
2,876,305 - ECD_02734 0.39 +0.2
2,876,305 - ECD_02734 0.39 +1.0
2,876,305 - ECD_02734 0.39 -0.2
2,876,442 - ECD_02734 0.57 -1.3
2,876,625 - ECD_02734 0.82 -0.7
2,876,628 - ECD_02734 0.82 +3.5
2,876,668 - ECD_02734 0.87 -0.2
2,876,684 - ECD_02734 0.90 -1.8
2,876,686 - ECD_02734 0.90 +0.6
2,876,795 - +0.8
2,876,795 - +1.5
2,876,883 + +1.3
2,876,884 - -0.2
2,876,888 - -1.1
2,877,011 + -0.2
2,877,028 + -0.5
2,877,028 + -2.0
2,877,029 - -0.5
2,877,029 - +0.0
2,877,035 - -0.3
2,877,041 + +0.2
2,877,069 - -2.1
2,877,079 + -0.8
2,877,112 + +1.3
2,877,113 - -0.5
2,877,138 + -0.1
2,877,139 - -0.1
2,877,157 + +0.9
2,877,158 - -0.6
2,877,455 + ECD_02735 0.15 -1.6
2,877,456 - ECD_02735 0.15 +0.0
2,877,489 - ECD_02735 0.16 -1.9
2,877,490 + ECD_02735 0.16 -0.4
2,877,490 + ECD_02735 0.16 +0.4
2,877,490 + ECD_02735 0.16 -0.5
2,877,490 + ECD_02735 0.16 +0.3
2,877,490 + ECD_02735 0.16 +0.0
2,877,490 + ECD_02735 0.16 -2.0
2,877,490 + ECD_02735 0.16 +0.0
2,877,491 - ECD_02735 0.16 -1.3
2,877,491 - ECD_02735 0.16 -1.0
2,877,491 - ECD_02735 0.16 +0.0
2,877,491 - ECD_02735 0.16 +0.3
2,877,527 + ECD_02735 0.17 -0.8
2,877,528 - ECD_02735 0.17 +1.3
2,877,528 - ECD_02735 0.17 +0.2
2,877,528 - ECD_02735 0.17 -1.4
2,877,528 - ECD_02735 0.17 +0.8
2,877,529 + ECD_02735 0.17 +1.0
2,877,529 + ECD_02735 0.17 -0.6
2,877,529 + ECD_02735 0.17 -0.5
2,877,529 + ECD_02735 0.17 -0.9
2,877,529 + ECD_02735 0.17 +0.0
2,877,530 - ECD_02735 0.18 +2.2
2,877,530 - ECD_02735 0.18 -1.0
2,877,530 - ECD_02735 0.18 +0.0
2,877,530 - ECD_02735 0.18 -0.4
2,877,530 - ECD_02735 0.18 +1.8
2,877,530 - ECD_02735 0.18 -1.0
2,877,530 - ECD_02735 0.18 -0.8
2,877,530 - ECD_02735 0.18 -0.6
2,877,530 - ECD_02735 0.18 -0.7
2,877,530 - ECD_02735 0.18 +1.3
2,877,595 + ECD_02735 0.20 +0.2
2,877,596 - ECD_02735 0.20 -0.8
2,877,596 - ECD_02735 0.20 -0.2
2,877,596 - ECD_02735 0.20 -0.5
2,877,596 - ECD_02735 0.20 -1.5
2,877,596 - ECD_02735 0.20 -1.3
2,877,596 - ECD_02735 0.20 +0.0
2,877,690 - ECD_02735 0.23 -0.6

Or see this region's nucleotide sequence