Strain Fitness in Escherichia coli BL21 around ECD_02655

Experiment: Bas48

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02654 and ECD_02655 are separated by 1 nucleotidesECD_02655 and ECD_02656 are separated by 57 nucleotidesECD_02656 and ECD_02657 are separated by 43 nucleotides ECD_02654: ECD_02654 - L-fuculokinase, at 2,775,748 to 2,777,166 _02654 ECD_02655: ECD_02655 - L-fucose mutarotase, at 2,777,168 to 2,777,590 _02655 ECD_02656: ECD_02656 - l-fucose operon activator, at 2,777,648 to 2,778,379 _02656 ECD_02657: ECD_02657 - 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent, at 2,778,423 to 2,779,523 _02657 Position (kb) 2777 2778Strain fitness (log2 ratio) -2 -1 0 1 2at 2776.225 kb on - strand, within ECD_02654at 2776.225 kb on - strand, within ECD_02654at 2776.266 kb on + strand, within ECD_02654at 2776.266 kb on + strand, within ECD_02654at 2776.401 kb on + strand, within ECD_02654at 2776.401 kb on + strand, within ECD_02654at 2776.402 kb on - strand, within ECD_02654at 2776.449 kb on - strand, within ECD_02654at 2776.533 kb on + strand, within ECD_02654at 2776.534 kb on - strand, within ECD_02654at 2776.572 kb on + strand, within ECD_02654at 2776.573 kb on - strand, within ECD_02654at 2776.583 kb on + strand, within ECD_02654at 2776.583 kb on + strand, within ECD_02654at 2776.633 kb on + strand, within ECD_02654at 2776.633 kb on + strand, within ECD_02654at 2776.633 kb on + strand, within ECD_02654at 2776.633 kb on + strand, within ECD_02654at 2776.633 kb on + strand, within ECD_02654at 2776.633 kb on + strand, within ECD_02654at 2776.633 kb on + strand, within ECD_02654at 2776.633 kb on + strand, within ECD_02654at 2776.634 kb on - strand, within ECD_02654at 2776.634 kb on - strand, within ECD_02654at 2776.634 kb on - strand, within ECD_02654at 2776.634 kb on - strand, within ECD_02654at 2776.634 kb on - strand, within ECD_02654at 2776.634 kb on - strand, within ECD_02654at 2776.634 kb on - strand, within ECD_02654at 2776.644 kb on + strand, within ECD_02654at 2776.644 kb on + strand, within ECD_02654at 2776.645 kb on - strand, within ECD_02654at 2776.645 kb on - strand, within ECD_02654at 2776.781 kb on + strand, within ECD_02654at 2776.781 kb on + strand, within ECD_02654at 2776.782 kb on - strand, within ECD_02654at 2776.822 kb on - strand, within ECD_02654at 2776.824 kb on + strand, within ECD_02654at 2776.827 kb on + strand, within ECD_02654at 2776.866 kb on - strand, within ECD_02654at 2776.878 kb on - strand, within ECD_02654at 2776.889 kb on + strand, within ECD_02654at 2776.931 kb on + strand, within ECD_02654at 2776.986 kb on + strand, within ECD_02654at 2776.986 kb on + strand, within ECD_02654at 2777.076 kb on + strandat 2777.122 kb on + strandat 2777.128 kb on + strandat 2777.151 kb on + strandat 2777.154 kb on - strandat 2777.190 kb on + strandat 2777.363 kb on + strand, within ECD_02655at 2777.363 kb on + strand, within ECD_02655at 2777.395 kb on - strand, within ECD_02655at 2777.421 kb on + strand, within ECD_02655at 2777.421 kb on + strand, within ECD_02655at 2777.438 kb on - strand, within ECD_02655at 2777.452 kb on - strand, within ECD_02655at 2777.498 kb on + strand, within ECD_02655at 2777.499 kb on - strand, within ECD_02655at 2777.560 kb on + strandat 2777.588 kb on + strandat 2777.596 kb on + strandat 2777.596 kb on + strandat 2777.647 kb on + strandat 2777.673 kb on + strandat 2777.695 kb on + strandat 2777.695 kb on + strandat 2777.695 kb on + strandat 2777.741 kb on - strand, within ECD_02656at 2777.812 kb on + strand, within ECD_02656at 2777.816 kb on + strand, within ECD_02656at 2777.816 kb on + strand, within ECD_02656at 2777.816 kb on + strand, within ECD_02656at 2777.816 kb on + strand, within ECD_02656at 2777.817 kb on - strand, within ECD_02656at 2777.817 kb on - strand, within ECD_02656at 2777.817 kb on - strand, within ECD_02656at 2777.818 kb on + strand, within ECD_02656at 2777.818 kb on + strand, within ECD_02656at 2777.819 kb on - strand, within ECD_02656at 2777.876 kb on + strand, within ECD_02656at 2777.943 kb on + strand, within ECD_02656at 2777.943 kb on + strand, within ECD_02656at 2777.966 kb on + strand, within ECD_02656at 2778.014 kb on - strand, within ECD_02656at 2778.092 kb on + strand, within ECD_02656at 2778.092 kb on + strand, within ECD_02656at 2778.093 kb on - strand, within ECD_02656at 2778.093 kb on - strand, within ECD_02656at 2778.101 kb on + strand, within ECD_02656at 2778.102 kb on - strand, within ECD_02656at 2778.102 kb on - strand, within ECD_02656at 2778.102 kb on - strand, within ECD_02656at 2778.102 kb on - strand, within ECD_02656at 2778.130 kb on + strand, within ECD_02656at 2778.131 kb on - strand, within ECD_02656at 2778.237 kb on + strand, within ECD_02656at 2778.271 kb on + strand, within ECD_02656at 2778.277 kb on + strand, within ECD_02656at 2778.324 kb on + strandat 2778.334 kb on + strandat 2778.334 kb on + strandat 2778.334 kb on + strandat 2778.334 kb on + strandat 2778.500 kb on - strandat 2778.500 kb on - strandat 2778.528 kb on + strandat 2778.529 kb on - strandat 2778.529 kb on - strandat 2778.529 kb on - strandat 2778.558 kb on - strand, within ECD_02657at 2778.559 kb on + strand, within ECD_02657at 2778.559 kb on + strand, within ECD_02657at 2778.559 kb on + strand, within ECD_02657at 2778.559 kb on + strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas48
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2,776,225 - ECD_02654 0.34 -0.4
2,776,225 - ECD_02654 0.34 -0.4
2,776,266 + ECD_02654 0.37 +0.1
2,776,266 + ECD_02654 0.37 +0.7
2,776,401 + ECD_02654 0.46 -0.3
2,776,401 + ECD_02654 0.46 -0.9
2,776,402 - ECD_02654 0.46 +0.3
2,776,449 - ECD_02654 0.49 +1.5
2,776,533 + ECD_02654 0.55 -0.1
2,776,534 - ECD_02654 0.55 +0.6
2,776,572 + ECD_02654 0.58 -0.6
2,776,573 - ECD_02654 0.58 -0.3
2,776,583 + ECD_02654 0.59 +0.7
2,776,583 + ECD_02654 0.59 -0.7
2,776,633 + ECD_02654 0.62 -0.0
2,776,633 + ECD_02654 0.62 -0.1
2,776,633 + ECD_02654 0.62 +0.4
2,776,633 + ECD_02654 0.62 +0.4
2,776,633 + ECD_02654 0.62 -0.3
2,776,633 + ECD_02654 0.62 +1.9
2,776,633 + ECD_02654 0.62 +0.1
2,776,633 + ECD_02654 0.62 -0.2
2,776,634 - ECD_02654 0.62 +0.5
2,776,634 - ECD_02654 0.62 +0.5
2,776,634 - ECD_02654 0.62 +0.6
2,776,634 - ECD_02654 0.62 +1.7
2,776,634 - ECD_02654 0.62 -0.4
2,776,634 - ECD_02654 0.62 +0.4
2,776,634 - ECD_02654 0.62 -0.8
2,776,644 + ECD_02654 0.63 -1.9
2,776,644 + ECD_02654 0.63 -0.9
2,776,645 - ECD_02654 0.63 -0.1
2,776,645 - ECD_02654 0.63 -0.3
2,776,781 + ECD_02654 0.73 -0.2
2,776,781 + ECD_02654 0.73 +0.5
2,776,782 - ECD_02654 0.73 +0.3
2,776,822 - ECD_02654 0.76 -0.6
2,776,824 + ECD_02654 0.76 +1.4
2,776,827 + ECD_02654 0.76 -1.4
2,776,866 - ECD_02654 0.79 +0.1
2,776,878 - ECD_02654 0.80 -0.2
2,776,889 + ECD_02654 0.80 -0.9
2,776,931 + ECD_02654 0.83 +0.9
2,776,986 + ECD_02654 0.87 -0.7
2,776,986 + ECD_02654 0.87 +0.6
2,777,076 + -1.2
2,777,122 + +0.1
2,777,128 + +0.3
2,777,151 + +0.6
2,777,154 - -1.9
2,777,190 + -0.4
2,777,363 + ECD_02655 0.46 -0.1
2,777,363 + ECD_02655 0.46 -0.8
2,777,395 - ECD_02655 0.54 +0.1
2,777,421 + ECD_02655 0.60 +0.2
2,777,421 + ECD_02655 0.60 -2.1
2,777,438 - ECD_02655 0.64 +0.1
2,777,452 - ECD_02655 0.67 -1.2
2,777,498 + ECD_02655 0.78 -0.7
2,777,499 - ECD_02655 0.78 -0.4
2,777,560 + +1.4
2,777,588 + -2.6
2,777,596 + -1.5
2,777,596 + -0.1
2,777,647 + -0.2
2,777,673 + -0.6
2,777,695 + +0.1
2,777,695 + +0.2
2,777,695 + -1.5
2,777,741 - ECD_02656 0.13 +0.1
2,777,812 + ECD_02656 0.22 -0.8
2,777,816 + ECD_02656 0.23 -1.9
2,777,816 + ECD_02656 0.23 +0.1
2,777,816 + ECD_02656 0.23 +1.3
2,777,816 + ECD_02656 0.23 +1.6
2,777,817 - ECD_02656 0.23 +0.4
2,777,817 - ECD_02656 0.23 -0.9
2,777,817 - ECD_02656 0.23 -0.3
2,777,818 + ECD_02656 0.23 +0.1
2,777,818 + ECD_02656 0.23 +0.6
2,777,819 - ECD_02656 0.23 +1.2
2,777,876 + ECD_02656 0.31 +0.6
2,777,943 + ECD_02656 0.40 +1.2
2,777,943 + ECD_02656 0.40 +1.3
2,777,966 + ECD_02656 0.43 -0.3
2,778,014 - ECD_02656 0.50 +0.3
2,778,092 + ECD_02656 0.61 -0.5
2,778,092 + ECD_02656 0.61 -0.7
2,778,093 - ECD_02656 0.61 -0.6
2,778,093 - ECD_02656 0.61 -0.5
2,778,101 + ECD_02656 0.62 +1.1
2,778,102 - ECD_02656 0.62 -0.2
2,778,102 - ECD_02656 0.62 -0.1
2,778,102 - ECD_02656 0.62 +0.5
2,778,102 - ECD_02656 0.62 +0.2
2,778,130 + ECD_02656 0.66 -0.6
2,778,131 - ECD_02656 0.66 -0.0
2,778,237 + ECD_02656 0.80 -1.5
2,778,271 + ECD_02656 0.85 +0.9
2,778,277 + ECD_02656 0.86 +0.5
2,778,324 + -0.3
2,778,334 + +0.4
2,778,334 + -0.1
2,778,334 + -0.9
2,778,334 + -0.5
2,778,500 - +1.5
2,778,500 - +0.1
2,778,528 + +0.2
2,778,529 - +0.1
2,778,529 - -0.4
2,778,529 - +0.8
2,778,558 - ECD_02657 0.12 -0.9
2,778,559 + ECD_02657 0.12 -0.9
2,778,559 + ECD_02657 0.12 +0.9
2,778,559 + ECD_02657 0.12 -0.2
2,778,559 + ECD_02657 0.12 -0.4
2,778,560 - ECD_02657 0.12 -0.8
2,778,560 - ECD_02657 0.12 -0.3
2,778,560 - ECD_02657 0.12 +0.5
2,778,560 - ECD_02657 0.12 -0.6
2,778,560 - ECD_02657 0.12 -1.5

Or see this region's nucleotide sequence