Strain Fitness in Escherichia coli BL21 around ECD_02416

Experiment: Bas48

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02415 and ECD_02416 are separated by 57 nucleotidesECD_02416 and ECD_02417 are separated by 11 nucleotidesECD_02417 and ECD_02418 are separated by 1 nucleotides ECD_02415: ECD_02415 - aminopeptidase B, at 2,521,000 to 2,522,283 _02415 ECD_02416: ECD_02416 - Fe(2+) donor and activity modulator for cysteine desulfurase, at 2,522,341 to 2,522,541 _02416 ECD_02417: ECD_02417 - [2Fe-2S] ferredoxin, at 2,522,553 to 2,522,888 _02417 ECD_02418: ECD_02418 - DnaK-like molecular chaperone specific for IscU, at 2,522,890 to 2,524,740 _02418 Position (kb) 2522 2523Strain fitness (log2 ratio) -1 0 1at 2521.537 kb on - strand, within ECD_02415at 2521.585 kb on - strand, within ECD_02415at 2521.701 kb on + strand, within ECD_02415at 2521.718 kb on + strand, within ECD_02415at 2521.719 kb on - strand, within ECD_02415at 2521.719 kb on - strand, within ECD_02415at 2521.812 kb on + strand, within ECD_02415at 2521.813 kb on - strand, within ECD_02415at 2521.814 kb on + strand, within ECD_02415at 2521.814 kb on + strand, within ECD_02415at 2522.052 kb on - strand, within ECD_02415at 2522.202 kb on + strandat 2522.213 kb on + strandat 2522.214 kb on - strandat 2522.286 kb on + strandat 2522.496 kb on - strand, within ECD_02416at 2522.496 kb on - strand, within ECD_02416at 2522.532 kb on + strandat 2522.533 kb on - strandat 2522.533 kb on - strandat 2522.533 kb on - strandat 2522.533 kb on - strandat 2522.533 kb on - strandat 2522.545 kb on - strandat 2522.545 kb on - strandat 2522.545 kb on - strandat 2522.545 kb on - strandat 2522.545 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas48
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2,521,537 - ECD_02415 0.42 -1.2
2,521,585 - ECD_02415 0.46 +0.1
2,521,701 + ECD_02415 0.55 +0.6
2,521,718 + ECD_02415 0.56 -0.2
2,521,719 - ECD_02415 0.56 +0.3
2,521,719 - ECD_02415 0.56 +0.2
2,521,812 + ECD_02415 0.63 -0.1
2,521,813 - ECD_02415 0.63 -0.7
2,521,814 + ECD_02415 0.63 -0.0
2,521,814 + ECD_02415 0.63 +1.4
2,522,052 - ECD_02415 0.82 +1.0
2,522,202 + +0.5
2,522,213 + -1.2
2,522,214 - +0.2
2,522,286 + +0.3
2,522,496 - ECD_02416 0.77 +1.3
2,522,496 - ECD_02416 0.77 +0.6
2,522,532 + +1.2
2,522,533 - +1.3
2,522,533 - +1.5
2,522,533 - +0.7
2,522,533 - +0.3
2,522,533 - +0.1
2,522,545 - +0.1
2,522,545 - -1.1
2,522,545 - +0.1
2,522,545 - -0.9
2,522,545 - +1.1

Or see this region's nucleotide sequence