Experiment: Bas48
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02415 and ECD_02416 are separated by 57 nucleotides ECD_02416 and ECD_02417 are separated by 11 nucleotides ECD_02417 and ECD_02418 are separated by 1 nucleotides
ECD_02415: ECD_02415 - aminopeptidase B, at 2,521,000 to 2,522,283
_02415
ECD_02416: ECD_02416 - Fe(2+) donor and activity modulator for cysteine desulfurase, at 2,522,341 to 2,522,541
_02416
ECD_02417: ECD_02417 - [2Fe-2S] ferredoxin, at 2,522,553 to 2,522,888
_02417
ECD_02418: ECD_02418 - DnaK-like molecular chaperone specific for IscU, at 2,522,890 to 2,524,740
_02418
Position (kb)
2522
2523 Strain fitness (log2 ratio)
-1
0
1 at 2521.537 kb on - strand, within ECD_02415 at 2521.585 kb on - strand, within ECD_02415 at 2521.701 kb on + strand, within ECD_02415 at 2521.718 kb on + strand, within ECD_02415 at 2521.719 kb on - strand, within ECD_02415 at 2521.719 kb on - strand, within ECD_02415 at 2521.812 kb on + strand, within ECD_02415 at 2521.813 kb on - strand, within ECD_02415 at 2521.814 kb on + strand, within ECD_02415 at 2521.814 kb on + strand, within ECD_02415 at 2522.052 kb on - strand, within ECD_02415 at 2522.202 kb on + strand at 2522.213 kb on + strand at 2522.214 kb on - strand at 2522.286 kb on + strand at 2522.496 kb on - strand, within ECD_02416 at 2522.496 kb on - strand, within ECD_02416 at 2522.532 kb on + strand at 2522.533 kb on - strand at 2522.533 kb on - strand at 2522.533 kb on - strand at 2522.533 kb on - strand at 2522.533 kb on - strand at 2522.545 kb on - strand at 2522.545 kb on - strand at 2522.545 kb on - strand at 2522.545 kb on - strand at 2522.545 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas48 remove 2,521,537 - ECD_02415 0.42 -1.2 2,521,585 - ECD_02415 0.46 +0.1 2,521,701 + ECD_02415 0.55 +0.6 2,521,718 + ECD_02415 0.56 -0.2 2,521,719 - ECD_02415 0.56 +0.3 2,521,719 - ECD_02415 0.56 +0.2 2,521,812 + ECD_02415 0.63 -0.1 2,521,813 - ECD_02415 0.63 -0.7 2,521,814 + ECD_02415 0.63 -0.0 2,521,814 + ECD_02415 0.63 +1.4 2,522,052 - ECD_02415 0.82 +1.0 2,522,202 + +0.5 2,522,213 + -1.2 2,522,214 - +0.2 2,522,286 + +0.3 2,522,496 - ECD_02416 0.77 +1.3 2,522,496 - ECD_02416 0.77 +0.6 2,522,532 + +1.2 2,522,533 - +1.3 2,522,533 - +1.5 2,522,533 - +0.7 2,522,533 - +0.3 2,522,533 - +0.1 2,522,545 - +0.1 2,522,545 - -1.1 2,522,545 - +0.1 2,522,545 - -0.9 2,522,545 - +1.1
Or see this region's nucleotide sequence