Strain Fitness in Escherichia coli BL21 around ECD_02759

Experiment: Bas48

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02758 and ECD_02759 are separated by 284 nucleotidesECD_02759 and ECD_02760 overlap by 4 nucleotidesECD_02760 and ECD_02761 are separated by 21 nucleotides ECD_02758: ECD_02758 - D-erythrose 4-phosphate dehydrogenase, at 2,903,530 to 2,904,549 _02758 ECD_02759: ECD_02759 - putative PanK family P-loop kinase, at 2,904,834 to 2,905,547 _02759 ECD_02760: ECD_02760 - MtlR family putative transcriptional repressor, at 2,905,544 to 2,906,053 _02760 ECD_02761: ECD_02761 - fructose 1,6 bisphosphatase isozyme, at 2,906,075 to 2,907,040 _02761 Position (kb) 2904 2905 2906Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2903.910 kb on + strand, within ECD_02758at 2903.911 kb on - strand, within ECD_02758at 2903.969 kb on + strand, within ECD_02758at 2903.970 kb on - strand, within ECD_02758at 2903.979 kb on + strand, within ECD_02758at 2904.034 kb on - strand, within ECD_02758at 2904.050 kb on - strand, within ECD_02758at 2904.070 kb on + strand, within ECD_02758at 2904.213 kb on + strand, within ECD_02758at 2904.214 kb on - strand, within ECD_02758at 2904.242 kb on + strand, within ECD_02758at 2904.242 kb on + strand, within ECD_02758at 2904.243 kb on - strand, within ECD_02758at 2904.243 kb on - strand, within ECD_02758at 2904.244 kb on + strand, within ECD_02758at 2904.244 kb on + strand, within ECD_02758at 2904.244 kb on + strand, within ECD_02758at 2904.245 kb on - strand, within ECD_02758at 2904.245 kb on - strand, within ECD_02758at 2904.245 kb on - strand, within ECD_02758at 2904.245 kb on - strand, within ECD_02758at 2904.265 kb on + strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.320 kb on - strand, within ECD_02758at 2904.367 kb on + strand, within ECD_02758at 2904.368 kb on - strand, within ECD_02758at 2904.368 kb on - strand, within ECD_02758at 2904.401 kb on + strand, within ECD_02758at 2904.402 kb on - strand, within ECD_02758at 2904.402 kb on - strand, within ECD_02758at 2904.402 kb on - strand, within ECD_02758at 2904.402 kb on - strand, within ECD_02758at 2904.460 kb on - strandat 2904.460 kb on - strandat 2904.485 kb on + strandat 2904.485 kb on + strandat 2904.485 kb on + strandat 2904.486 kb on - strandat 2904.504 kb on + strandat 2904.530 kb on - strandat 2904.541 kb on + strandat 2904.549 kb on + strandat 2904.549 kb on + strandat 2904.549 kb on + strandat 2904.549 kb on + strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.550 kb on - strandat 2904.595 kb on - strandat 2904.595 kb on - strandat 2904.623 kb on - strandat 2904.623 kb on - strandat 2904.623 kb on - strandat 2904.651 kb on - strandat 2904.688 kb on - strandat 2904.709 kb on - strandat 2904.742 kb on + strandat 2904.742 kb on + strandat 2904.743 kb on - strandat 2904.743 kb on - strandat 2904.743 kb on - strandat 2904.743 kb on - strandat 2904.805 kb on - strandat 2904.805 kb on - strandat 2904.805 kb on - strandat 2904.873 kb on + strandat 2904.874 kb on - strandat 2904.874 kb on - strandat 2904.874 kb on - strandat 2904.877 kb on - strandat 2904.941 kb on - strand, within ECD_02759at 2905.083 kb on + strand, within ECD_02759at 2905.166 kb on - strand, within ECD_02759at 2905.178 kb on + strand, within ECD_02759at 2905.178 kb on + strand, within ECD_02759at 2905.178 kb on + strand, within ECD_02759at 2905.178 kb on + strand, within ECD_02759at 2905.179 kb on - strand, within ECD_02759at 2905.179 kb on - strand, within ECD_02759at 2905.179 kb on - strand, within ECD_02759at 2905.283 kb on + strand, within ECD_02759at 2905.283 kb on + strand, within ECD_02759at 2905.284 kb on - strand, within ECD_02759at 2905.284 kb on - strand, within ECD_02759at 2905.288 kb on + strand, within ECD_02759at 2905.288 kb on + strand, within ECD_02759at 2905.289 kb on - strand, within ECD_02759at 2905.289 kb on - strand, within ECD_02759at 2905.289 kb on - strand, within ECD_02759at 2905.289 kb on - strand, within ECD_02759at 2905.289 kb on - strand, within ECD_02759at 2905.354 kb on + strand, within ECD_02759at 2905.355 kb on - strand, within ECD_02759at 2905.473 kb on - strand, within ECD_02759at 2905.476 kb on + strandat 2905.502 kb on - strandat 2905.502 kb on - strandat 2905.502 kb on - strandat 2905.512 kb on + strandat 2905.553 kb on + strandat 2905.554 kb on - strandat 2905.554 kb on - strandat 2905.609 kb on + strand, within ECD_02760at 2905.668 kb on + strand, within ECD_02760at 2905.800 kb on + strand, within ECD_02760at 2905.801 kb on - strand, within ECD_02760at 2905.810 kb on + strand, within ECD_02760at 2905.810 kb on + strand, within ECD_02760at 2905.811 kb on - strand, within ECD_02760at 2905.830 kb on + strand, within ECD_02760at 2905.987 kb on + strand, within ECD_02760at 2905.988 kb on - strand, within ECD_02760at 2906.066 kb on - strandat 2906.090 kb on + strandat 2906.090 kb on + strandat 2906.091 kb on - strandat 2906.091 kb on - strandat 2906.091 kb on - strandat 2906.091 kb on - strandat 2906.091 kb on - strandat 2906.093 kb on + strandat 2906.093 kb on + strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.098 kb on + strandat 2906.098 kb on + strandat 2906.099 kb on - strandat 2906.127 kb on - strandat 2906.127 kb on - strandat 2906.127 kb on - strandat 2906.127 kb on - strandat 2906.204 kb on - strand, within ECD_02761at 2906.319 kb on + strand, within ECD_02761at 2906.320 kb on - strand, within ECD_02761at 2906.427 kb on + strand, within ECD_02761at 2906.427 kb on + strand, within ECD_02761at 2906.427 kb on + strand, within ECD_02761at 2906.428 kb on - strand, within ECD_02761

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas48
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2,903,910 + ECD_02758 0.37 +1.2
2,903,911 - ECD_02758 0.37 +0.5
2,903,969 + ECD_02758 0.43 +0.3
2,903,970 - ECD_02758 0.43 -0.3
2,903,979 + ECD_02758 0.44 -0.0
2,904,034 - ECD_02758 0.49 -0.3
2,904,050 - ECD_02758 0.51 -0.3
2,904,070 + ECD_02758 0.53 +1.3
2,904,213 + ECD_02758 0.67 -0.1
2,904,214 - ECD_02758 0.67 +2.1
2,904,242 + ECD_02758 0.70 -0.6
2,904,242 + ECD_02758 0.70 +0.2
2,904,243 - ECD_02758 0.70 +1.7
2,904,243 - ECD_02758 0.70 -0.0
2,904,244 + ECD_02758 0.70 +2.5
2,904,244 + ECD_02758 0.70 -0.4
2,904,244 + ECD_02758 0.70 +1.0
2,904,245 - ECD_02758 0.70 +0.4
2,904,245 - ECD_02758 0.70 +1.7
2,904,245 - ECD_02758 0.70 -0.2
2,904,245 - ECD_02758 0.70 +0.9
2,904,265 + ECD_02758 0.72 +2.8
2,904,266 - ECD_02758 0.72 +1.5
2,904,266 - ECD_02758 0.72 -0.4
2,904,266 - ECD_02758 0.72 +0.9
2,904,266 - ECD_02758 0.72 +0.7
2,904,266 - ECD_02758 0.72 +2.1
2,904,320 - ECD_02758 0.77 +1.6
2,904,367 + ECD_02758 0.82 +1.6
2,904,368 - ECD_02758 0.82 +0.6
2,904,368 - ECD_02758 0.82 +1.5
2,904,401 + ECD_02758 0.85 +1.2
2,904,402 - ECD_02758 0.85 -0.7
2,904,402 - ECD_02758 0.85 +0.9
2,904,402 - ECD_02758 0.85 -0.0
2,904,402 - ECD_02758 0.85 -0.1
2,904,460 - -0.0
2,904,460 - +0.1
2,904,485 + +3.0
2,904,485 + +0.7
2,904,485 + -0.3
2,904,486 - +0.8
2,904,504 + -0.3
2,904,530 - -0.4
2,904,541 + -0.0
2,904,549 + -0.4
2,904,549 + +2.4
2,904,549 + -0.6
2,904,549 + +1.2
2,904,550 - -0.1
2,904,550 - +1.0
2,904,550 - +0.8
2,904,550 - +1.8
2,904,550 - +0.2
2,904,550 - +0.5
2,904,550 - -0.8
2,904,550 - +2.4
2,904,550 - +0.1
2,904,550 - -0.9
2,904,550 - +0.2
2,904,550 - -0.5
2,904,595 - +0.5
2,904,595 - -0.8
2,904,623 - +1.8
2,904,623 - -0.2
2,904,623 - -0.6
2,904,651 - +2.1
2,904,688 - -0.2
2,904,709 - +1.2
2,904,742 + -0.1
2,904,742 + +0.3
2,904,743 - +0.1
2,904,743 - -1.2
2,904,743 - -2.0
2,904,743 - -0.0
2,904,805 - +2.3
2,904,805 - +3.5
2,904,805 - +0.1
2,904,873 + +1.7
2,904,874 - -0.4
2,904,874 - -2.6
2,904,874 - -0.6
2,904,877 - -0.9
2,904,941 - ECD_02759 0.15 +1.6
2,905,083 + ECD_02759 0.35 +0.3
2,905,166 - ECD_02759 0.46 +0.6
2,905,178 + ECD_02759 0.48 +1.4
2,905,178 + ECD_02759 0.48 -1.2
2,905,178 + ECD_02759 0.48 +0.5
2,905,178 + ECD_02759 0.48 -1.0
2,905,179 - ECD_02759 0.48 -0.0
2,905,179 - ECD_02759 0.48 +0.7
2,905,179 - ECD_02759 0.48 +2.2
2,905,283 + ECD_02759 0.63 +2.1
2,905,283 + ECD_02759 0.63 +1.3
2,905,284 - ECD_02759 0.63 -0.2
2,905,284 - ECD_02759 0.63 -1.6
2,905,288 + ECD_02759 0.64 -0.0
2,905,288 + ECD_02759 0.64 -1.8
2,905,289 - ECD_02759 0.64 -0.8
2,905,289 - ECD_02759 0.64 -0.4
2,905,289 - ECD_02759 0.64 +1.5
2,905,289 - ECD_02759 0.64 +0.4
2,905,289 - ECD_02759 0.64 -0.5
2,905,354 + ECD_02759 0.73 -0.2
2,905,355 - ECD_02759 0.73 -1.5
2,905,473 - ECD_02759 0.89 +0.7
2,905,476 + -0.6
2,905,502 - +1.5
2,905,502 - +1.2
2,905,502 - +2.1
2,905,512 + +1.5
2,905,553 + +0.4
2,905,554 - +1.7
2,905,554 - -1.1
2,905,609 + ECD_02760 0.13 -1.0
2,905,668 + ECD_02760 0.24 -0.7
2,905,800 + ECD_02760 0.50 +2.0
2,905,801 - ECD_02760 0.50 +0.1
2,905,810 + ECD_02760 0.52 -0.2
2,905,810 + ECD_02760 0.52 -0.2
2,905,811 - ECD_02760 0.52 +1.5
2,905,830 + ECD_02760 0.56 +0.3
2,905,987 + ECD_02760 0.87 +0.4
2,905,988 - ECD_02760 0.87 +1.3
2,906,066 - +1.8
2,906,090 + +2.1
2,906,090 + -0.0
2,906,091 - -0.2
2,906,091 - +1.6
2,906,091 - +1.0
2,906,091 - +1.0
2,906,091 - -0.5
2,906,093 + +0.7
2,906,093 + -0.1
2,906,094 - +1.0
2,906,094 - -0.4
2,906,094 - +1.3
2,906,094 - +2.2
2,906,094 - +0.5
2,906,094 - +0.1
2,906,094 - +0.7
2,906,094 - -0.9
2,906,095 + +2.1
2,906,095 + +0.4
2,906,095 + +0.3
2,906,095 + +1.2
2,906,095 + -0.5
2,906,095 + -1.2
2,906,095 + +0.1
2,906,095 + +0.2
2,906,095 + -0.0
2,906,096 - -0.7
2,906,096 - -0.9
2,906,096 - +0.8
2,906,096 - -0.3
2,906,096 - -0.4
2,906,096 - +0.3
2,906,098 + -0.6
2,906,098 + -2.0
2,906,099 - +1.3
2,906,127 - +0.8
2,906,127 - +0.1
2,906,127 - +1.7
2,906,127 - +0.6
2,906,204 - ECD_02761 0.13 +0.2
2,906,319 + ECD_02761 0.25 +1.3
2,906,320 - ECD_02761 0.25 +0.4
2,906,427 + ECD_02761 0.36 +1.3
2,906,427 + ECD_02761 0.36 +1.5
2,906,427 + ECD_02761 0.36 -0.1
2,906,428 - ECD_02761 0.37 -0.1

Or see this region's nucleotide sequence