Experiment: Bas48
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01044 and ECD_01045 are separated by 393 nucleotides ECD_01045 and ECD_01046 overlap by 8 nucleotides
ECD_01044: ECD_01044 - OPG biosynthetic transmembrane succinyltransferase, at 1,110,351 to 1,111,508
_01044
ECD_01045: ECD_01045 - OPG biosynthetic periplasmic beta-1,6 branching glycosyltransferase, at 1,111,902 to 1,113,437
_01045
ECD_01046: ECD_01046 - OPG biosynthetic ACP-dependent transmembrane UDP-glucose beta-1,2 glycosyltransferase; nutrient-dependent cell size regulator, FtsZ assembly antagonist, at 1,113,430 to 1,115,973
_01046
Position (kb)
1111
1112
1113
1114 Strain fitness (log2 ratio)
-1
0
1
2 at 1111.404 kb on - strand at 1111.404 kb on - strand at 1111.509 kb on - strand at 1111.627 kb on + strand at 1111.666 kb on + strand at 1111.683 kb on - strand at 1111.838 kb on - strand at 1112.185 kb on + strand, within ECD_01045 at 1112.657 kb on + strand, within ECD_01045 at 1112.700 kb on + strand, within ECD_01045 at 1113.171 kb on - strand, within ECD_01045 at 1113.194 kb on + strand, within ECD_01045 at 1113.414 kb on + strand at 1113.414 kb on + strand at 1113.421 kb on + strand at 1113.822 kb on + strand, within ECD_01046 at 1113.894 kb on + strand, within ECD_01046 at 1113.993 kb on + strand, within ECD_01046 at 1114.110 kb on + strand, within ECD_01046 at 1114.110 kb on + strand, within ECD_01046 at 1114.110 kb on + strand, within ECD_01046 at 1114.112 kb on + strand, within ECD_01046 at 1114.398 kb on + strand, within ECD_01046
Per-strain Table
Position Strand Gene LocusTag Fraction Bas48 remove 1,111,404 - +2.6 1,111,404 - +0.3 1,111,509 - -0.4 1,111,627 + -0.0 1,111,666 + -1.0 1,111,683 - +1.6 1,111,838 - +1.1 1,112,185 + ECD_01045 0.18 +0.6 1,112,657 + ECD_01045 0.49 -0.2 1,112,700 + ECD_01045 0.52 +0.5 1,113,171 - ECD_01045 0.83 +0.2 1,113,194 + ECD_01045 0.84 +1.7 1,113,414 + +2.3 1,113,414 + +1.8 1,113,421 + +0.1 1,113,822 + ECD_01046 0.15 +1.6 1,113,894 + ECD_01046 0.18 -0.8 1,113,993 + ECD_01046 0.22 +0.7 1,114,110 + ECD_01046 0.27 +1.0 1,114,110 + ECD_01046 0.27 -0.0 1,114,110 + ECD_01046 0.27 +0.4 1,114,112 + ECD_01046 0.27 +1.4 1,114,398 + ECD_01046 0.38 +1.2
Or see this region's nucleotide sequence