Strain Fitness in Escherichia coli BL21 around ECD_00505

Experiment: Bas48

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00504 and ECD_00505 overlap by 82 nucleotides ECD_00504: ECD_00504 - IS1 protein InsB, at 543,652 to 544,155 _00504 ECD_00505: ECD_00505 - IS1 protein InsA, at 544,074 to 544,349 _00505 Position (kb) 544 545Strain fitness (log2 ratio) -2 -1 0 1at 543.126 kb on - strandat 543.206 kb on - strandat 543.258 kb on + strandat 543.275 kb on + strandat 543.283 kb on + strandat 543.449 kb on + strandat 543.469 kb on - strandat 543.503 kb on - strandat 543.546 kb on - strandat 543.608 kb on + strandat 543.615 kb on - strandat 544.374 kb on + strandat 544.432 kb on + strandat 544.460 kb on + strandat 544.509 kb on + strandat 544.622 kb on - strandat 544.622 kb on - strandat 544.622 kb on - strandat 544.622 kb on - strandat 544.811 kb on + strandat 544.811 kb on + strandat 544.812 kb on - strandat 544.812 kb on - strandat 544.816 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas48
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543,126 - +1.4
543,206 - +0.1
543,258 + +0.8
543,275 + -1.1
543,283 + -0.1
543,449 + +1.2
543,469 - +0.4
543,503 - +0.3
543,546 - -0.3
543,608 + +1.1
543,615 - +0.3
544,374 + -2.2
544,432 + +0.1
544,460 + -0.1
544,509 + -0.0
544,622 - -0.8
544,622 - +0.3
544,622 - +0.1
544,622 - +1.1
544,811 + -0.1
544,811 + +0.7
544,812 - -0.7
544,812 - +0.2
544,816 - -0.9

Or see this region's nucleotide sequence