Strain Fitness in Escherichia coli BL21 around ECD_02619

Experiment: Bas34

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02618 and ECD_02619 are separated by 318 nucleotidesECD_02619 and ECD_02620 are separated by 26 nucleotides ECD_02618: ECD_02618 - putative SDR family oxidoreductase, at 2,731,649 to 2,732,434 _02618 ECD_02619: ECD_02619 - putative MFS transporter, inner membrane protein, at 2,732,753 to 2,734,030 _02619 ECD_02620: ECD_02620 - putative kinase, at 2,734,057 to 2,735,535 _02620 Position (kb) 2732 2733 2734 2735Strain fitness (log2 ratio) -2 -1 0 1 2at 2731.962 kb on - strand, within ECD_02618at 2732.034 kb on + strand, within ECD_02618at 2732.039 kb on + strand, within ECD_02618at 2732.120 kb on - strand, within ECD_02618at 2732.290 kb on + strand, within ECD_02618at 2732.434 kb on + strandat 2732.434 kb on + strandat 2732.435 kb on - strandat 2732.438 kb on + strandat 2732.474 kb on + strandat 2732.499 kb on - strandat 2732.511 kb on - strandat 2732.541 kb on + strandat 2732.654 kb on - strandat 2732.835 kb on + strandat 2733.035 kb on + strand, within ECD_02619at 2733.094 kb on - strand, within ECD_02619at 2733.142 kb on + strand, within ECD_02619at 2733.195 kb on + strand, within ECD_02619at 2733.195 kb on + strand, within ECD_02619at 2733.196 kb on - strand, within ECD_02619at 2733.215 kb on - strand, within ECD_02619at 2733.275 kb on - strand, within ECD_02619at 2733.281 kb on + strand, within ECD_02619at 2733.281 kb on + strand, within ECD_02619at 2733.281 kb on + strand, within ECD_02619at 2733.281 kb on + strand, within ECD_02619at 2733.281 kb on + strand, within ECD_02619at 2733.282 kb on - strand, within ECD_02619at 2733.282 kb on - strand, within ECD_02619at 2733.282 kb on - strand, within ECD_02619at 2733.282 kb on - strand, within ECD_02619at 2733.282 kb on - strand, within ECD_02619at 2733.283 kb on + strand, within ECD_02619at 2733.294 kb on - strand, within ECD_02619at 2733.462 kb on - strand, within ECD_02619at 2733.462 kb on - strand, within ECD_02619at 2733.462 kb on - strand, within ECD_02619at 2733.489 kb on - strand, within ECD_02619at 2733.489 kb on - strand, within ECD_02619at 2733.489 kb on - strand, within ECD_02619at 2733.503 kb on + strand, within ECD_02619at 2733.503 kb on + strand, within ECD_02619at 2733.503 kb on + strand, within ECD_02619at 2733.504 kb on - strand, within ECD_02619at 2733.504 kb on - strand, within ECD_02619at 2733.530 kb on + strand, within ECD_02619at 2733.531 kb on - strand, within ECD_02619at 2733.555 kb on + strand, within ECD_02619at 2733.588 kb on + strand, within ECD_02619at 2733.588 kb on + strand, within ECD_02619at 2733.589 kb on - strand, within ECD_02619at 2733.599 kb on + strand, within ECD_02619at 2733.600 kb on - strand, within ECD_02619at 2733.600 kb on - strand, within ECD_02619at 2733.664 kb on - strand, within ECD_02619at 2733.688 kb on + strand, within ECD_02619at 2733.746 kb on + strand, within ECD_02619at 2733.746 kb on + strand, within ECD_02619at 2733.800 kb on + strand, within ECD_02619at 2733.800 kb on + strand, within ECD_02619at 2733.800 kb on + strand, within ECD_02619at 2733.801 kb on - strand, within ECD_02619at 2733.806 kb on - strand, within ECD_02619at 2733.820 kb on - strand, within ECD_02619at 2733.823 kb on + strand, within ECD_02619at 2733.824 kb on - strand, within ECD_02619at 2733.871 kb on + strand, within ECD_02619at 2733.872 kb on - strand, within ECD_02619at 2733.919 kb on + strandat 2733.919 kb on + strandat 2733.919 kb on + strandat 2733.919 kb on + strandat 2733.919 kb on + strandat 2733.919 kb on + strandat 2733.920 kb on - strandat 2733.920 kb on - strandat 2733.920 kb on - strandat 2733.964 kb on + strandat 2734.018 kb on + strandat 2734.018 kb on + strandat 2734.018 kb on + strandat 2734.019 kb on - strandat 2734.028 kb on + strandat 2734.028 kb on + strandat 2734.028 kb on + strandat 2734.028 kb on + strandat 2734.028 kb on + strandat 2734.029 kb on - strandat 2734.029 kb on - strandat 2734.029 kb on - strandat 2734.029 kb on - strandat 2734.043 kb on - strandat 2734.069 kb on + strandat 2734.076 kb on + strandat 2734.117 kb on + strandat 2734.117 kb on + strandat 2734.117 kb on + strandat 2734.117 kb on + strandat 2734.117 kb on + strandat 2734.117 kb on + strandat 2734.117 kb on + strandat 2734.117 kb on + strandat 2734.117 kb on + strandat 2734.118 kb on - strandat 2734.157 kb on + strandat 2734.160 kb on + strandat 2734.226 kb on + strand, within ECD_02620at 2734.226 kb on + strand, within ECD_02620at 2734.226 kb on + strand, within ECD_02620at 2734.226 kb on + strand, within ECD_02620at 2734.269 kb on + strand, within ECD_02620at 2734.269 kb on + strand, within ECD_02620at 2734.278 kb on + strand, within ECD_02620at 2734.278 kb on + strand, within ECD_02620at 2734.390 kb on + strand, within ECD_02620at 2734.401 kb on + strand, within ECD_02620at 2734.417 kb on + strand, within ECD_02620at 2734.417 kb on + strand, within ECD_02620at 2734.417 kb on + strand, within ECD_02620at 2734.417 kb on + strand, within ECD_02620at 2734.417 kb on + strand, within ECD_02620at 2734.418 kb on - strand, within ECD_02620at 2734.418 kb on - strand, within ECD_02620at 2734.418 kb on - strand, within ECD_02620at 2734.418 kb on - strand, within ECD_02620at 2734.418 kb on - strand, within ECD_02620at 2734.467 kb on + strand, within ECD_02620at 2734.468 kb on - strand, within ECD_02620at 2734.487 kb on - strand, within ECD_02620at 2734.487 kb on - strand, within ECD_02620at 2734.510 kb on + strand, within ECD_02620at 2734.510 kb on + strand, within ECD_02620at 2734.510 kb on + strand, within ECD_02620at 2734.510 kb on + strand, within ECD_02620at 2734.510 kb on + strand, within ECD_02620at 2734.512 kb on + strand, within ECD_02620at 2734.512 kb on + strand, within ECD_02620at 2734.512 kb on + strand, within ECD_02620at 2734.512 kb on + strand, within ECD_02620at 2734.551 kb on + strand, within ECD_02620at 2734.552 kb on - strand, within ECD_02620at 2734.557 kb on + strand, within ECD_02620at 2734.572 kb on + strand, within ECD_02620at 2734.573 kb on - strand, within ECD_02620at 2734.614 kb on + strand, within ECD_02620at 2734.691 kb on + strand, within ECD_02620at 2734.750 kb on + strand, within ECD_02620at 2734.750 kb on + strand, within ECD_02620at 2734.750 kb on + strand, within ECD_02620at 2734.750 kb on + strand, within ECD_02620at 2734.751 kb on - strand, within ECD_02620at 2734.751 kb on - strand, within ECD_02620at 2734.802 kb on - strand, within ECD_02620at 2734.802 kb on - strand, within ECD_02620at 2734.812 kb on + strand, within ECD_02620at 2734.812 kb on + strand, within ECD_02620at 2734.821 kb on + strand, within ECD_02620at 2734.822 kb on - strand, within ECD_02620at 2734.840 kb on + strand, within ECD_02620at 2734.841 kb on - strand, within ECD_02620at 2734.849 kb on + strand, within ECD_02620at 2734.911 kb on - strand, within ECD_02620at 2734.911 kb on - strand, within ECD_02620at 2734.911 kb on - strand, within ECD_02620at 2734.953 kb on - strand, within ECD_02620at 2734.989 kb on + strand, within ECD_02620

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas34
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2,731,962 - ECD_02618 0.40 +1.6
2,732,034 + ECD_02618 0.49 -1.0
2,732,039 + ECD_02618 0.50 +0.9
2,732,120 - ECD_02618 0.60 +0.6
2,732,290 + ECD_02618 0.82 -0.5
2,732,434 + -0.5
2,732,434 + +0.7
2,732,435 - +0.5
2,732,438 + -0.5
2,732,474 + -0.2
2,732,499 - +0.2
2,732,511 - -0.1
2,732,541 + -0.5
2,732,654 - -0.1
2,732,835 + +0.3
2,733,035 + ECD_02619 0.22 +1.1
2,733,094 - ECD_02619 0.27 +0.4
2,733,142 + ECD_02619 0.30 -0.1
2,733,195 + ECD_02619 0.35 +0.6
2,733,195 + ECD_02619 0.35 -0.0
2,733,196 - ECD_02619 0.35 -0.7
2,733,215 - ECD_02619 0.36 +0.6
2,733,275 - ECD_02619 0.41 -0.6
2,733,281 + ECD_02619 0.41 +0.1
2,733,281 + ECD_02619 0.41 +0.2
2,733,281 + ECD_02619 0.41 +0.7
2,733,281 + ECD_02619 0.41 -1.1
2,733,281 + ECD_02619 0.41 +1.6
2,733,282 - ECD_02619 0.41 +1.5
2,733,282 - ECD_02619 0.41 -0.5
2,733,282 - ECD_02619 0.41 -0.2
2,733,282 - ECD_02619 0.41 -0.1
2,733,282 - ECD_02619 0.41 +0.3
2,733,283 + ECD_02619 0.41 +1.7
2,733,294 - ECD_02619 0.42 -0.2
2,733,462 - ECD_02619 0.55 -0.4
2,733,462 - ECD_02619 0.55 +0.6
2,733,462 - ECD_02619 0.55 -0.7
2,733,489 - ECD_02619 0.58 -0.4
2,733,489 - ECD_02619 0.58 -0.7
2,733,489 - ECD_02619 0.58 +1.3
2,733,503 + ECD_02619 0.59 +0.5
2,733,503 + ECD_02619 0.59 -1.7
2,733,503 + ECD_02619 0.59 +0.4
2,733,504 - ECD_02619 0.59 +0.5
2,733,504 - ECD_02619 0.59 +1.6
2,733,530 + ECD_02619 0.61 +1.1
2,733,531 - ECD_02619 0.61 +0.4
2,733,555 + ECD_02619 0.63 -0.2
2,733,588 + ECD_02619 0.65 -0.9
2,733,588 + ECD_02619 0.65 -1.3
2,733,589 - ECD_02619 0.65 +2.4
2,733,599 + ECD_02619 0.66 +0.0
2,733,600 - ECD_02619 0.66 +0.3
2,733,600 - ECD_02619 0.66 +0.6
2,733,664 - ECD_02619 0.71 -0.1
2,733,688 + ECD_02619 0.73 -0.3
2,733,746 + ECD_02619 0.78 -0.1
2,733,746 + ECD_02619 0.78 +0.8
2,733,800 + ECD_02619 0.82 +0.8
2,733,800 + ECD_02619 0.82 +0.0
2,733,800 + ECD_02619 0.82 +0.1
2,733,801 - ECD_02619 0.82 +0.4
2,733,806 - ECD_02619 0.82 +0.8
2,733,820 - ECD_02619 0.83 +1.5
2,733,823 + ECD_02619 0.84 +1.5
2,733,824 - ECD_02619 0.84 -0.3
2,733,871 + ECD_02619 0.87 -0.1
2,733,872 - ECD_02619 0.88 -1.7
2,733,919 + +0.2
2,733,919 + +0.4
2,733,919 + -0.3
2,733,919 + +0.5
2,733,919 + +0.4
2,733,919 + +0.1
2,733,920 - +0.3
2,733,920 - -0.4
2,733,920 - -0.4
2,733,964 + +1.1
2,734,018 + -0.9
2,734,018 + -0.6
2,734,018 + +0.0
2,734,019 - +1.1
2,734,028 + +0.6
2,734,028 + -0.5
2,734,028 + +0.4
2,734,028 + -1.1
2,734,028 + +0.8
2,734,029 - -1.0
2,734,029 - -1.5
2,734,029 - +0.0
2,734,029 - +0.5
2,734,043 - +0.2
2,734,069 + -0.1
2,734,076 + +1.1
2,734,117 + -1.1
2,734,117 + +0.3
2,734,117 + -0.4
2,734,117 + -0.1
2,734,117 + +1.1
2,734,117 + +0.2
2,734,117 + -2.1
2,734,117 + +0.6
2,734,117 + +0.2
2,734,118 - -1.4
2,734,157 + +0.3
2,734,160 + +0.8
2,734,226 + ECD_02620 0.11 -0.4
2,734,226 + ECD_02620 0.11 +1.5
2,734,226 + ECD_02620 0.11 +0.4
2,734,226 + ECD_02620 0.11 +0.2
2,734,269 + ECD_02620 0.14 +0.4
2,734,269 + ECD_02620 0.14 -0.8
2,734,278 + ECD_02620 0.15 -0.4
2,734,278 + ECD_02620 0.15 +1.2
2,734,390 + ECD_02620 0.23 +0.2
2,734,401 + ECD_02620 0.23 -0.7
2,734,417 + ECD_02620 0.24 +0.0
2,734,417 + ECD_02620 0.24 -0.7
2,734,417 + ECD_02620 0.24 +0.0
2,734,417 + ECD_02620 0.24 -0.2
2,734,417 + ECD_02620 0.24 +0.6
2,734,418 - ECD_02620 0.24 -0.2
2,734,418 - ECD_02620 0.24 -0.0
2,734,418 - ECD_02620 0.24 -1.2
2,734,418 - ECD_02620 0.24 -0.3
2,734,418 - ECD_02620 0.24 +0.5
2,734,467 + ECD_02620 0.28 -0.4
2,734,468 - ECD_02620 0.28 +0.6
2,734,487 - ECD_02620 0.29 -2.0
2,734,487 - ECD_02620 0.29 -0.9
2,734,510 + ECD_02620 0.31 -1.6
2,734,510 + ECD_02620 0.31 +0.4
2,734,510 + ECD_02620 0.31 -0.2
2,734,510 + ECD_02620 0.31 +0.1
2,734,510 + ECD_02620 0.31 +0.5
2,734,512 + ECD_02620 0.31 +0.3
2,734,512 + ECD_02620 0.31 +1.8
2,734,512 + ECD_02620 0.31 +0.2
2,734,512 + ECD_02620 0.31 -0.1
2,734,551 + ECD_02620 0.33 +0.2
2,734,552 - ECD_02620 0.33 -0.1
2,734,557 + ECD_02620 0.34 +1.2
2,734,572 + ECD_02620 0.35 -0.3
2,734,573 - ECD_02620 0.35 +0.4
2,734,614 + ECD_02620 0.38 -1.1
2,734,691 + ECD_02620 0.43 +0.1
2,734,750 + ECD_02620 0.47 +0.6
2,734,750 + ECD_02620 0.47 -0.1
2,734,750 + ECD_02620 0.47 +0.1
2,734,750 + ECD_02620 0.47 -0.0
2,734,751 - ECD_02620 0.47 +0.0
2,734,751 - ECD_02620 0.47 +0.2
2,734,802 - ECD_02620 0.50 -0.1
2,734,802 - ECD_02620 0.50 -1.4
2,734,812 + ECD_02620 0.51 -0.7
2,734,812 + ECD_02620 0.51 +0.3
2,734,821 + ECD_02620 0.52 +0.7
2,734,822 - ECD_02620 0.52 +0.1
2,734,840 + ECD_02620 0.53 +0.3
2,734,841 - ECD_02620 0.53 -0.1
2,734,849 + ECD_02620 0.54 +2.2
2,734,911 - ECD_02620 0.58 +0.2
2,734,911 - ECD_02620 0.58 +0.2
2,734,911 - ECD_02620 0.58 -1.3
2,734,953 - ECD_02620 0.61 -0.2
2,734,989 + ECD_02620 0.63 +0.9

Or see this region's nucleotide sequence