Strain Fitness in Escherichia coli BL21 around ECD_01666

Experiment: Bas34

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01665 and ECD_01666 are separated by 315 nucleotidesECD_01666 and ECD_01667 are separated by 19 nucleotides ECD_01665: ECD_01665 - putative DNA-binding transcriptional regulator, at 1,722,806 to 1,723,717 _01665 ECD_01666: ECD_01666 - putative electron transfer flavoprotein subunit, at 1,724,033 to 1,724,797 _01666 ECD_01667: ECD_01667 - putative electron transfer flavoprotein, FAD-binding subunit, at 1,724,817 to 1,725,755 _01667 Position (kb) 1724 1725Strain fitness (log2 ratio) -1 0 1at 1724.040 kb on + strandat 1724.276 kb on + strand, within ECD_01666at 1724.276 kb on + strand, within ECD_01666at 1724.278 kb on + strand, within ECD_01666at 1724.719 kb on + strand, within ECD_01666at 1725.287 kb on + strand, within ECD_01667at 1725.321 kb on + strand, within ECD_01667at 1725.322 kb on - strand, within ECD_01667

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas34
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1,724,040 + -0.8
1,724,276 + ECD_01666 0.32 +0.8
1,724,276 + ECD_01666 0.32 +0.8
1,724,278 + ECD_01666 0.32 +0.4
1,724,719 + ECD_01666 0.90 +0.9
1,725,287 + ECD_01667 0.50 -0.1
1,725,321 + ECD_01667 0.54 +0.3
1,725,322 - ECD_01667 0.54 -0.7

Or see this region's nucleotide sequence