Strain Fitness in Escherichia coli BL21 around ECD_00960

Experiment: Bas34

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00959 and ECD_00960 are separated by 185 nucleotidesECD_00960 and ECD_00961 are separated by 75 nucleotides ECD_00959: ECD_00959 - putative peptidase, at 1,021,628 to 1,023,388 _00959 ECD_00960: ECD_00960 - Ter macrodomain organizer matS-binding protein, at 1,023,574 to 1,024,026 _00960 ECD_00961: ECD_00961 - outer membrane protein A (3a, at 1,024,102 to 1,025,142 _00961 Position (kb) 1023 1024 1025Strain fitness (log2 ratio) -2 -1 0 1at 1022.610 kb on - strand, within ECD_00959at 1022.618 kb on - strand, within ECD_00959at 1022.618 kb on - strand, within ECD_00959at 1022.630 kb on - strand, within ECD_00959at 1022.687 kb on - strand, within ECD_00959at 1022.704 kb on - strand, within ECD_00959at 1022.912 kb on - strand, within ECD_00959at 1022.972 kb on - strand, within ECD_00959at 1023.668 kb on + strand, within ECD_00960at 1023.668 kb on + strand, within ECD_00960at 1023.837 kb on + strand, within ECD_00960at 1024.246 kb on - strand, within ECD_00961at 1024.365 kb on - strand, within ECD_00961at 1024.419 kb on - strand, within ECD_00961at 1024.783 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.893 kb on - strand, within ECD_00961at 1024.900 kb on - strand, within ECD_00961at 1024.938 kb on - strand, within ECD_00961at 1024.938 kb on - strand, within ECD_00961at 1024.938 kb on - strand, within ECD_00961

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas34
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1,022,610 - ECD_00959 0.56 -0.2
1,022,618 - ECD_00959 0.56 +0.6
1,022,618 - ECD_00959 0.56 +0.1
1,022,630 - ECD_00959 0.57 -0.8
1,022,687 - ECD_00959 0.60 +0.5
1,022,704 - ECD_00959 0.61 -0.6
1,022,912 - ECD_00959 0.73 -1.3
1,022,972 - ECD_00959 0.76 -0.3
1,023,668 + ECD_00960 0.21 -2.0
1,023,668 + ECD_00960 0.21 -0.1
1,023,837 + ECD_00960 0.58 -0.9
1,024,246 - ECD_00961 0.14 -2.0
1,024,365 - ECD_00961 0.25 +0.1
1,024,419 - ECD_00961 0.30 -0.4
1,024,783 - ECD_00961 0.65 -1.2
1,024,800 - ECD_00961 0.67 +0.4
1,024,800 - ECD_00961 0.67 +0.4
1,024,800 - ECD_00961 0.67 +0.2
1,024,800 - ECD_00961 0.67 -0.8
1,024,800 - ECD_00961 0.67 -0.5
1,024,866 - ECD_00961 0.73 -0.4
1,024,866 - ECD_00961 0.73 +0.4
1,024,866 - ECD_00961 0.73 +0.7
1,024,866 - ECD_00961 0.73 +0.6
1,024,866 - ECD_00961 0.73 -0.7
1,024,866 - ECD_00961 0.73 -0.8
1,024,866 - ECD_00961 0.73 +1.2
1,024,893 - ECD_00961 0.76 -0.6
1,024,900 - ECD_00961 0.77 -0.7
1,024,938 - ECD_00961 0.80 -0.0
1,024,938 - ECD_00961 0.80 -0.2
1,024,938 - ECD_00961 0.80 +1.6

Or see this region's nucleotide sequence