Strain Fitness in Escherichia coli BL21 around ECD_03814

Experiment: Bas34

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03812 and ECD_03813 are separated by 425 nucleotidesECD_03813 and ECD_03814 are separated by 84 nucleotidesECD_03814 and ECD_03815 are separated by 92 nucleotides ECD_03812: ECD_03812 - glycerol facilitator, at 4,025,167 to 4,026,012 _03812 ECD_03813: ECD_03813 - FtsZ stabilizer, septal ring assembly factor, cell division stimulator, at 4,026,438 to 4,026,683 _03813 ECD_03814: ECD_03814 - ribonuclease E (RNase E) inhibitor protein, at 4,026,768 to 4,027,253 _03814 ECD_03815: ECD_03815 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase, at 4,027,346 to 4,028,272 _03815 Position (kb) 4026 4027 4028Strain fitness (log2 ratio) -2 -1 0 1 2at 4025.799 kb on + strand, within ECD_03812at 4025.812 kb on - strand, within ECD_03812at 4025.843 kb on + strand, within ECD_03812at 4025.844 kb on - strand, within ECD_03812at 4025.844 kb on - strand, within ECD_03812at 4026.031 kb on + strandat 4026.032 kb on - strandat 4026.032 kb on - strandat 4026.032 kb on - strandat 4026.043 kb on + strandat 4026.043 kb on + strandat 4026.043 kb on + strandat 4026.043 kb on + strandat 4026.044 kb on - strandat 4026.088 kb on + strandat 4026.088 kb on + strandat 4026.120 kb on + strandat 4026.175 kb on - strandat 4026.189 kb on + strandat 4026.255 kb on + strandat 4026.255 kb on + strandat 4026.256 kb on - strandat 4026.256 kb on - strandat 4026.256 kb on - strandat 4026.256 kb on - strandat 4026.293 kb on + strandat 4026.336 kb on + strandat 4026.336 kb on + strandat 4026.336 kb on + strandat 4026.337 kb on - strandat 4026.352 kb on + strandat 4026.353 kb on - strandat 4026.353 kb on - strandat 4026.369 kb on + strandat 4026.369 kb on + strandat 4026.373 kb on - strandat 4026.373 kb on - strandat 4026.437 kb on + strandat 4026.438 kb on - strandat 4026.481 kb on + strand, within ECD_03813at 4026.685 kb on + strandat 4026.685 kb on + strandat 4026.712 kb on + strandat 4026.712 kb on + strandat 4026.719 kb on + strandat 4026.719 kb on + strandat 4026.820 kb on + strand, within ECD_03814at 4026.958 kb on - strand, within ECD_03814at 4026.958 kb on - strand, within ECD_03814at 4026.958 kb on - strand, within ECD_03814at 4027.138 kb on - strand, within ECD_03814at 4027.146 kb on + strand, within ECD_03814at 4027.147 kb on - strand, within ECD_03814at 4027.147 kb on - strand, within ECD_03814at 4027.219 kb on + strandat 4027.219 kb on + strandat 4027.220 kb on - strandat 4027.220 kb on - strandat 4027.220 kb on - strandat 4027.220 kb on - strandat 4027.241 kb on + strandat 4027.242 kb on - strandat 4027.247 kb on - strandat 4027.253 kb on + strandat 4027.254 kb on - strandat 4027.259 kb on + strandat 4027.260 kb on - strandat 4027.260 kb on - strandat 4027.260 kb on - strandat 4027.291 kb on - strandat 4027.417 kb on + strandat 4027.418 kb on - strandat 4027.467 kb on + strand, within ECD_03815at 4027.468 kb on - strand, within ECD_03815at 4027.526 kb on - strand, within ECD_03815at 4027.543 kb on + strand, within ECD_03815at 4027.543 kb on + strand, within ECD_03815at 4027.614 kb on - strand, within ECD_03815at 4027.676 kb on - strand, within ECD_03815at 4027.679 kb on - strand, within ECD_03815at 4027.679 kb on - strand, within ECD_03815at 4027.686 kb on - strand, within ECD_03815at 4027.744 kb on + strand, within ECD_03815at 4027.744 kb on + strand, within ECD_03815at 4027.744 kb on + strand, within ECD_03815at 4027.744 kb on + strand, within ECD_03815at 4027.744 kb on + strand, within ECD_03815at 4027.745 kb on - strand, within ECD_03815at 4027.754 kb on + strand, within ECD_03815at 4027.755 kb on - strand, within ECD_03815at 4027.755 kb on - strand, within ECD_03815at 4027.759 kb on - strand, within ECD_03815at 4027.759 kb on - strand, within ECD_03815at 4027.808 kb on - strand, within ECD_03815at 4027.823 kb on - strand, within ECD_03815at 4027.824 kb on + strand, within ECD_03815at 4027.825 kb on - strand, within ECD_03815at 4027.825 kb on - strand, within ECD_03815at 4027.825 kb on - strand, within ECD_03815at 4027.830 kb on + strand, within ECD_03815at 4027.831 kb on - strand, within ECD_03815at 4027.851 kb on + strand, within ECD_03815at 4027.852 kb on - strand, within ECD_03815at 4027.852 kb on - strand, within ECD_03815at 4027.852 kb on - strand, within ECD_03815at 4027.916 kb on - strand, within ECD_03815at 4027.916 kb on - strand, within ECD_03815at 4027.973 kb on - strand, within ECD_03815at 4027.973 kb on - strand, within ECD_03815at 4028.105 kb on + strand, within ECD_03815at 4028.105 kb on + strand, within ECD_03815at 4028.106 kb on - strand, within ECD_03815at 4028.106 kb on - strand, within ECD_03815at 4028.119 kb on + strand, within ECD_03815at 4028.119 kb on + strand, within ECD_03815at 4028.188 kb on + strandat 4028.225 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas34
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4,025,799 + ECD_03812 0.75 -0.1
4,025,812 - ECD_03812 0.76 -0.5
4,025,843 + ECD_03812 0.80 +0.0
4,025,844 - ECD_03812 0.80 +0.7
4,025,844 - ECD_03812 0.80 +1.8
4,026,031 + -0.3
4,026,032 - +0.7
4,026,032 - +0.1
4,026,032 - +0.3
4,026,043 + +0.0
4,026,043 + -0.0
4,026,043 + +0.4
4,026,043 + +1.0
4,026,044 - +0.9
4,026,088 + +0.4
4,026,088 + -0.3
4,026,120 + -0.7
4,026,175 - -0.7
4,026,189 + -1.3
4,026,255 + +0.1
4,026,255 + +0.4
4,026,256 - +0.4
4,026,256 - +0.5
4,026,256 - -0.6
4,026,256 - +0.8
4,026,293 + -0.0
4,026,336 + -0.3
4,026,336 + -0.7
4,026,336 + -2.5
4,026,337 - -0.2
4,026,352 + +0.6
4,026,353 - +0.3
4,026,353 - +0.8
4,026,369 + +0.7
4,026,369 + +0.4
4,026,373 - -1.1
4,026,373 - +0.4
4,026,437 + -0.2
4,026,438 - -0.8
4,026,481 + ECD_03813 0.17 +0.1
4,026,685 + +0.3
4,026,685 + +0.1
4,026,712 + +0.3
4,026,712 + -0.5
4,026,719 + -0.1
4,026,719 + -0.4
4,026,820 + ECD_03814 0.11 +0.9
4,026,958 - ECD_03814 0.39 -0.4
4,026,958 - ECD_03814 0.39 +0.7
4,026,958 - ECD_03814 0.39 +0.3
4,027,138 - ECD_03814 0.76 -0.1
4,027,146 + ECD_03814 0.78 +0.4
4,027,147 - ECD_03814 0.78 -0.4
4,027,147 - ECD_03814 0.78 +1.4
4,027,219 + -0.5
4,027,219 + +0.7
4,027,220 - +0.0
4,027,220 - +0.1
4,027,220 - -0.2
4,027,220 - +1.2
4,027,241 + -0.5
4,027,242 - -0.7
4,027,247 - -0.8
4,027,253 + +0.5
4,027,254 - -0.2
4,027,259 + +0.0
4,027,260 - +0.2
4,027,260 - -0.1
4,027,260 - +0.9
4,027,291 - +0.5
4,027,417 + -1.4
4,027,418 - -0.5
4,027,467 + ECD_03815 0.13 -1.7
4,027,468 - ECD_03815 0.13 +0.2
4,027,526 - ECD_03815 0.19 -1.1
4,027,543 + ECD_03815 0.21 -0.2
4,027,543 + ECD_03815 0.21 +0.5
4,027,614 - ECD_03815 0.29 +0.1
4,027,676 - ECD_03815 0.36 -0.1
4,027,679 - ECD_03815 0.36 -0.3
4,027,679 - ECD_03815 0.36 +0.2
4,027,686 - ECD_03815 0.37 -0.6
4,027,744 + ECD_03815 0.43 -0.3
4,027,744 + ECD_03815 0.43 -0.7
4,027,744 + ECD_03815 0.43 +0.7
4,027,744 + ECD_03815 0.43 +0.6
4,027,744 + ECD_03815 0.43 +0.0
4,027,745 - ECD_03815 0.43 +0.6
4,027,754 + ECD_03815 0.44 -0.6
4,027,755 - ECD_03815 0.44 +0.6
4,027,755 - ECD_03815 0.44 -1.6
4,027,759 - ECD_03815 0.45 +0.4
4,027,759 - ECD_03815 0.45 +0.3
4,027,808 - ECD_03815 0.50 +0.5
4,027,823 - ECD_03815 0.51 +0.2
4,027,824 + ECD_03815 0.52 +0.1
4,027,825 - ECD_03815 0.52 -0.8
4,027,825 - ECD_03815 0.52 +0.3
4,027,825 - ECD_03815 0.52 +0.8
4,027,830 + ECD_03815 0.52 +0.0
4,027,831 - ECD_03815 0.52 +0.3
4,027,851 + ECD_03815 0.54 +0.1
4,027,852 - ECD_03815 0.55 +0.1
4,027,852 - ECD_03815 0.55 -1.0
4,027,852 - ECD_03815 0.55 -1.3
4,027,916 - ECD_03815 0.61 -0.3
4,027,916 - ECD_03815 0.61 +0.0
4,027,973 - ECD_03815 0.68 -0.0
4,027,973 - ECD_03815 0.68 +0.1
4,028,105 + ECD_03815 0.82 +0.1
4,028,105 + ECD_03815 0.82 +0.1
4,028,106 - ECD_03815 0.82 +0.2
4,028,106 - ECD_03815 0.82 +0.3
4,028,119 + ECD_03815 0.83 -1.3
4,028,119 + ECD_03815 0.83 +0.2
4,028,188 + +0.3
4,028,225 + -0.4

Or see this region's nucleotide sequence