Experiment: Bas34
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03265 and ECD_03266 are separated by 58 nucleotides ECD_03266 and ECD_03267 are separated by 360 nucleotides ECD_03267 and ECD_03268 are separated by 44 nucleotides
ECD_03265: ECD_03265 - DNA catabolic protein, at 3,405,243 to 3,405,926
_03265
ECD_03266: ECD_03266 - Fe/S biogenesis protein, putative scaffold/chaperone protein, at 3,405,985 to 3,406,560
_03266
ECD_03267: ECD_03267 - gluconate transporter, high-affinity GNT I system, at 3,406,921 to 3,408,237
_03267
ECD_03268: ECD_03268 - 4-alpha-glucanotransferase (amylomaltase), at 3,408,282 to 3,410,366
_03268
Position (kb)
3406
3407
3408
3409 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3405.924 kb on + strand at 3405.925 kb on - strand at 3405.925 kb on - strand at 3405.945 kb on - strand at 3405.950 kb on - strand at 3405.957 kb on + strand at 3405.958 kb on - strand at 3405.993 kb on + strand at 3405.993 kb on + strand at 3406.112 kb on - strand, within ECD_03266 at 3406.112 kb on - strand, within ECD_03266 at 3406.174 kb on + strand, within ECD_03266 at 3406.187 kb on + strand, within ECD_03266 at 3406.188 kb on - strand, within ECD_03266 at 3406.188 kb on - strand, within ECD_03266 at 3406.198 kb on + strand, within ECD_03266 at 3406.198 kb on + strand, within ECD_03266 at 3406.282 kb on - strand, within ECD_03266 at 3406.321 kb on + strand, within ECD_03266 at 3406.322 kb on - strand, within ECD_03266 at 3406.322 kb on - strand, within ECD_03266 at 3406.322 kb on - strand, within ECD_03266 at 3406.323 kb on + strand, within ECD_03266 at 3406.323 kb on + strand, within ECD_03266 at 3406.323 kb on + strand, within ECD_03266 at 3406.324 kb on - strand, within ECD_03266 at 3406.324 kb on - strand, within ECD_03266 at 3406.324 kb on - strand, within ECD_03266 at 3406.324 kb on - strand, within ECD_03266 at 3406.552 kb on + strand at 3406.552 kb on + strand at 3406.553 kb on - strand at 3406.553 kb on - strand at 3406.556 kb on - strand at 3406.556 kb on - strand at 3406.558 kb on + strand at 3406.558 kb on + strand at 3406.558 kb on + strand at 3406.559 kb on - strand at 3406.564 kb on - strand at 3406.577 kb on + strand at 3406.577 kb on + strand at 3406.597 kb on + strand at 3406.598 kb on - strand at 3406.617 kb on - strand at 3406.689 kb on - strand at 3406.689 kb on - strand at 3406.802 kb on - strand at 3406.839 kb on - strand at 3406.949 kb on + strand at 3407.052 kb on + strand at 3407.225 kb on + strand, within ECD_03267 at 3407.238 kb on + strand, within ECD_03267 at 3407.260 kb on + strand, within ECD_03267 at 3407.260 kb on + strand, within ECD_03267 at 3407.261 kb on - strand, within ECD_03267 at 3407.332 kb on + strand, within ECD_03267 at 3407.332 kb on + strand, within ECD_03267 at 3407.333 kb on - strand, within ECD_03267 at 3407.333 kb on - strand, within ECD_03267 at 3407.333 kb on - strand, within ECD_03267 at 3407.342 kb on + strand, within ECD_03267 at 3407.343 kb on - strand, within ECD_03267 at 3407.343 kb on - strand, within ECD_03267 at 3407.437 kb on - strand, within ECD_03267 at 3407.450 kb on - strand, within ECD_03267 at 3407.457 kb on + strand, within ECD_03267 at 3407.458 kb on - strand, within ECD_03267 at 3407.621 kb on + strand, within ECD_03267 at 3407.622 kb on - strand, within ECD_03267 at 3407.891 kb on - strand, within ECD_03267 at 3407.891 kb on - strand, within ECD_03267 at 3407.891 kb on - strand, within ECD_03267 at 3407.891 kb on - strand, within ECD_03267 at 3408.079 kb on - strand, within ECD_03267 at 3408.130 kb on + strand at 3408.283 kb on + strand at 3408.283 kb on + strand at 3408.283 kb on + strand at 3408.283 kb on + strand at 3408.399 kb on - strand at 3408.401 kb on - strand at 3408.463 kb on - strand at 3408.578 kb on - strand, within ECD_03268 at 3408.578 kb on - strand, within ECD_03268 at 3408.578 kb on - strand, within ECD_03268 at 3408.578 kb on - strand, within ECD_03268 at 3408.578 kb on - strand, within ECD_03268 at 3408.582 kb on - strand, within ECD_03268 at 3408.582 kb on - strand, within ECD_03268 at 3408.582 kb on - strand, within ECD_03268 at 3408.582 kb on - strand, within ECD_03268 at 3408.582 kb on - strand, within ECD_03268 at 3408.582 kb on - strand, within ECD_03268 at 3408.582 kb on - strand, within ECD_03268 at 3408.818 kb on - strand, within ECD_03268 at 3408.818 kb on - strand, within ECD_03268 at 3408.893 kb on + strand, within ECD_03268 at 3408.894 kb on - strand, within ECD_03268 at 3408.909 kb on - strand, within ECD_03268 at 3408.958 kb on + strand, within ECD_03268 at 3408.959 kb on - strand, within ECD_03268 at 3408.959 kb on - strand, within ECD_03268 at 3408.959 kb on - strand, within ECD_03268 at 3408.991 kb on - strand, within ECD_03268 at 3409.085 kb on - strand, within ECD_03268 at 3409.085 kb on - strand, within ECD_03268 at 3409.085 kb on - strand, within ECD_03268 at 3409.085 kb on - strand, within ECD_03268 at 3409.104 kb on - strand, within ECD_03268 at 3409.104 kb on - strand, within ECD_03268
Per-strain Table
Position Strand Gene LocusTag Fraction Bas34 remove 3,405,924 + -0.1 3,405,925 - -0.8 3,405,925 - +1.0 3,405,945 - -1.3 3,405,950 - -0.6 3,405,957 + +0.4 3,405,958 - +0.4 3,405,993 + +0.3 3,405,993 + -0.3 3,406,112 - ECD_03266 0.22 +0.6 3,406,112 - ECD_03266 0.22 +0.0 3,406,174 + ECD_03266 0.33 -0.0 3,406,187 + ECD_03266 0.35 -0.2 3,406,188 - ECD_03266 0.35 -1.0 3,406,188 - ECD_03266 0.35 +0.2 3,406,198 + ECD_03266 0.37 -0.6 3,406,198 + ECD_03266 0.37 -0.1 3,406,282 - ECD_03266 0.52 +0.4 3,406,321 + ECD_03266 0.58 -1.5 3,406,322 - ECD_03266 0.59 +0.0 3,406,322 - ECD_03266 0.59 -0.0 3,406,322 - ECD_03266 0.59 -0.4 3,406,323 + ECD_03266 0.59 -1.5 3,406,323 + ECD_03266 0.59 -0.5 3,406,323 + ECD_03266 0.59 -0.2 3,406,324 - ECD_03266 0.59 -1.5 3,406,324 - ECD_03266 0.59 -0.6 3,406,324 - ECD_03266 0.59 -1.0 3,406,324 - ECD_03266 0.59 -0.1 3,406,552 + -0.3 3,406,552 + +0.6 3,406,553 - -0.3 3,406,553 - +1.3 3,406,556 - +0.7 3,406,556 - +0.2 3,406,558 + +0.0 3,406,558 + -0.1 3,406,558 + -0.7 3,406,559 - +0.1 3,406,564 - -0.2 3,406,577 + -0.1 3,406,577 + -0.2 3,406,597 + +1.2 3,406,598 - +0.1 3,406,617 - +0.0 3,406,689 - +0.5 3,406,689 - +0.6 3,406,802 - +0.0 3,406,839 - +0.5 3,406,949 + +0.0 3,407,052 + +0.5 3,407,225 + ECD_03267 0.23 +0.4 3,407,238 + ECD_03267 0.24 -0.4 3,407,260 + ECD_03267 0.26 +0.6 3,407,260 + ECD_03267 0.26 -0.1 3,407,261 - ECD_03267 0.26 -0.3 3,407,332 + ECD_03267 0.31 -0.1 3,407,332 + ECD_03267 0.31 -0.9 3,407,333 - ECD_03267 0.31 +0.1 3,407,333 - ECD_03267 0.31 -1.1 3,407,333 - ECD_03267 0.31 +0.7 3,407,342 + ECD_03267 0.32 -1.0 3,407,343 - ECD_03267 0.32 -0.5 3,407,343 - ECD_03267 0.32 -0.4 3,407,437 - ECD_03267 0.39 -1.7 3,407,450 - ECD_03267 0.40 +0.1 3,407,457 + ECD_03267 0.41 -0.6 3,407,458 - ECD_03267 0.41 -0.2 3,407,621 + ECD_03267 0.53 +0.1 3,407,622 - ECD_03267 0.53 -0.1 3,407,891 - ECD_03267 0.74 -1.4 3,407,891 - ECD_03267 0.74 -0.2 3,407,891 - ECD_03267 0.74 -0.4 3,407,891 - ECD_03267 0.74 +0.5 3,408,079 - ECD_03267 0.88 +0.0 3,408,130 + +0.4 3,408,283 + +1.4 3,408,283 + +0.6 3,408,283 + -0.9 3,408,283 + -0.3 3,408,399 - -0.4 3,408,401 - +0.9 3,408,463 - -0.7 3,408,578 - ECD_03268 0.14 -0.6 3,408,578 - ECD_03268 0.14 +0.1 3,408,578 - ECD_03268 0.14 -1.3 3,408,578 - ECD_03268 0.14 +0.3 3,408,578 - ECD_03268 0.14 -0.8 3,408,582 - ECD_03268 0.14 -1.2 3,408,582 - ECD_03268 0.14 +0.6 3,408,582 - ECD_03268 0.14 -0.2 3,408,582 - ECD_03268 0.14 -0.1 3,408,582 - ECD_03268 0.14 -0.1 3,408,582 - ECD_03268 0.14 -0.2 3,408,582 - ECD_03268 0.14 +0.1 3,408,818 - ECD_03268 0.26 -0.5 3,408,818 - ECD_03268 0.26 -2.5 3,408,893 + ECD_03268 0.29 -0.1 3,408,894 - ECD_03268 0.29 +0.7 3,408,909 - ECD_03268 0.30 -0.2 3,408,958 + ECD_03268 0.32 +1.8 3,408,959 - ECD_03268 0.32 +0.0 3,408,959 - ECD_03268 0.32 -0.1 3,408,959 - ECD_03268 0.32 -0.2 3,408,991 - ECD_03268 0.34 -0.3 3,409,085 - ECD_03268 0.39 -1.1 3,409,085 - ECD_03268 0.39 -0.1 3,409,085 - ECD_03268 0.39 +0.5 3,409,085 - ECD_03268 0.39 +0.1 3,409,104 - ECD_03268 0.39 +0.3 3,409,104 - ECD_03268 0.39 -0.0
Or see this region's nucleotide sequence