Strain Fitness in Bosea sp. OAE506 around ABIE41_RS11760

Experiment: R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS11750 and ABIE41_RS11755 are separated by 165 nucleotidesABIE41_RS11755 and ABIE41_RS11760 are separated by 44 nucleotidesABIE41_RS11760 and ABIE41_RS11765 are separated by 7 nucleotides ABIE41_RS11750: ABIE41_RS11750 - HAD family phosphatase, at 2,408,543 to 2,409,244 _RS11750 ABIE41_RS11755: ABIE41_RS11755 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 2,409,410 to 2,410,105 _RS11755 ABIE41_RS11760: ABIE41_RS11760 - rhodanese-like domain-containing protein, at 2,410,150 to 2,410,572 _RS11760 ABIE41_RS11765: ABIE41_RS11765 - pyridoxal phosphate-dependent aminotransferase, at 2,410,580 to 2,411,782 _RS11765 Position (kb) 2410 2411Strain fitness (log2 ratio) -2 -1 0 1 2at 2409.173 kb on + strand, within ABIE41_RS11750at 2409.173 kb on + strand, within ABIE41_RS11750at 2409.173 kb on + strand, within ABIE41_RS11750at 2409.174 kb on - strandat 2409.174 kb on - strandat 2409.174 kb on - strandat 2409.390 kb on + strandat 2410.157 kb on + strandat 2410.463 kb on + strand, within ABIE41_RS11760at 2410.463 kb on + strand, within ABIE41_RS11760

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
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2,409,173 + ABIE41_RS11750 0.90 -1.0
2,409,173 + ABIE41_RS11750 0.90 -0.7
2,409,173 + ABIE41_RS11750 0.90 +2.5
2,409,174 - +1.2
2,409,174 - -1.2
2,409,174 - -0.4
2,409,390 + +1.5
2,410,157 + +0.1
2,410,463 + ABIE41_RS11760 0.74 -2.7
2,410,463 + ABIE41_RS11760 0.74 -0.1

Or see this region's nucleotide sequence