Strain Fitness in Escherichia coli BL21 around ECD_02622

Experiment: Bas58

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02621 and ECD_02622 are separated by 317 nucleotidesECD_02622 and ECD_04351 are separated by 138 nucleotidesECD_04351 and ECD_02623 are separated by 13 nucleotides ECD_02621: ECD_02621 - hypothetical protein, at 2,736,170 to 2,737,018 _02621 ECD_02622: ECD_02622 - 7-carboxy-7-deazaguanine synthase; queosine biosynthesis, at 2,737,336 to 2,738,007 _02622 ECD_04351: ECD_04351 - membrane stress resistance protein, at 2,738,146 to 2,738,286 _04351 ECD_02623: ECD_02623 - TPM domain protein, putative phosphatase, at 2,738,300 to 2,739,172 _02623 Position (kb) 2737 2738 2739Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2736.476 kb on - strand, within ECD_02621at 2736.477 kb on + strand, within ECD_02621at 2736.632 kb on + strand, within ECD_02621at 2736.633 kb on - strand, within ECD_02621at 2736.633 kb on - strand, within ECD_02621at 2736.634 kb on + strand, within ECD_02621at 2736.634 kb on + strand, within ECD_02621at 2736.756 kb on + strand, within ECD_02621at 2736.757 kb on - strand, within ECD_02621at 2736.876 kb on - strand, within ECD_02621at 2736.877 kb on + strand, within ECD_02621at 2737.047 kb on + strandat 2737.324 kb on - strandat 2737.352 kb on + strandat 2737.356 kb on + strandat 2737.356 kb on + strandat 2737.487 kb on - strand, within ECD_02622at 2737.634 kb on - strand, within ECD_02622at 2737.668 kb on + strand, within ECD_02622at 2737.813 kb on - strand, within ECD_02622at 2737.813 kb on - strand, within ECD_02622at 2738.008 kb on - strandat 2738.008 kb on - strandat 2738.029 kb on - strandat 2738.401 kb on + strand, within ECD_02623at 2738.484 kb on + strand, within ECD_02623at 2738.626 kb on - strand, within ECD_02623at 2738.785 kb on + strand, within ECD_02623

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas58
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2,736,476 - ECD_02621 0.36 +1.0
2,736,477 + ECD_02621 0.36 +0.1
2,736,632 + ECD_02621 0.54 -0.4
2,736,633 - ECD_02621 0.55 -0.3
2,736,633 - ECD_02621 0.55 -0.6
2,736,634 + ECD_02621 0.55 +0.4
2,736,634 + ECD_02621 0.55 +0.8
2,736,756 + ECD_02621 0.69 -0.0
2,736,757 - ECD_02621 0.69 +1.3
2,736,876 - ECD_02621 0.83 -1.3
2,736,877 + ECD_02621 0.83 -0.0
2,737,047 + +0.2
2,737,324 - +0.7
2,737,352 + -3.3
2,737,356 + -2.0
2,737,356 + -2.0
2,737,487 - ECD_02622 0.22 -0.8
2,737,634 - ECD_02622 0.44 -1.4
2,737,668 + ECD_02622 0.49 -0.8
2,737,813 - ECD_02622 0.71 -3.7
2,737,813 - ECD_02622 0.71 -1.0
2,738,008 - -0.2
2,738,008 - +3.4
2,738,029 - +2.7
2,738,401 + ECD_02623 0.12 -0.4
2,738,484 + ECD_02623 0.21 +1.3
2,738,626 - ECD_02623 0.37 -0.0
2,738,785 + ECD_02623 0.56 +0.3

Or see this region's nucleotide sequence