Strain Fitness in Escherichia coli BL21 around ECD_02312

Experiment: Bas58

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02311 and ECD_02312 are separated by 70 nucleotidesECD_02312 and ECD_02313 are separated by 229 nucleotides ECD_02311: ECD_02311 - DNA ligase, NAD(+)-dependent, at 2,400,548 to 2,402,563 _02311 ECD_02312: ECD_02312 - FtsZ stabilizer, at 2,402,634 to 2,403,620 _02312 ECD_02313: ECD_02313 - sulfate transporter, sulfite inhibited, at 2,403,850 to 2,404,611 _02313 Position (kb) 2402 2403 2404Strain fitness (log2 ratio) -1 0 1at 2403.666 kb on - strandat 2403.733 kb on - strandat 2403.892 kb on + strandat 2404.055 kb on + strand, within ECD_02313at 2404.055 kb on + strand, within ECD_02313at 2404.055 kb on + strand, within ECD_02313at 2404.118 kb on - strand, within ECD_02313at 2404.137 kb on + strand, within ECD_02313at 2404.166 kb on + strand, within ECD_02313at 2404.304 kb on + strand, within ECD_02313at 2404.304 kb on + strand, within ECD_02313at 2404.371 kb on + strand, within ECD_02313at 2404.396 kb on + strand, within ECD_02313at 2404.405 kb on + strand, within ECD_02313at 2404.476 kb on + strand, within ECD_02313at 2404.525 kb on - strand, within ECD_02313at 2404.537 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas58
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2,403,666 - -0.6
2,403,733 - -1.4
2,403,892 + -1.6
2,404,055 + ECD_02313 0.27 +1.5
2,404,055 + ECD_02313 0.27 -0.8
2,404,055 + ECD_02313 0.27 -0.4
2,404,118 - ECD_02313 0.35 +0.6
2,404,137 + ECD_02313 0.38 -0.1
2,404,166 + ECD_02313 0.41 +1.0
2,404,304 + ECD_02313 0.60 -0.0
2,404,304 + ECD_02313 0.60 +0.8
2,404,371 + ECD_02313 0.68 -0.6
2,404,396 + ECD_02313 0.72 +0.4
2,404,405 + ECD_02313 0.73 -0.2
2,404,476 + ECD_02313 0.82 +0.2
2,404,525 - ECD_02313 0.89 -1.1
2,404,537 - -0.1

Or see this region's nucleotide sequence