Strain Fitness in Escherichia coli BL21 around ECD_02936

Experiment: Laval1263

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02934 and ECD_02935 are separated by 237 nucleotidesECD_02935 and ECD_02936 are separated by 110 nucleotidesECD_02936 and ECD_02937 are separated by 194 nucleotides ECD_02934: ECD_02934 - tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein, at 3,075,612 to 3,076,625 _02934 ECD_02935: ECD_02935 - 30S ribosomal subunit protein S21, at 3,076,863 to 3,077,078 _02935 ECD_02936: ECD_02936 - DNA primase, at 3,077,189 to 3,078,934 _02936 ECD_02937: ECD_02937 - RNA polymerase, sigma 70 (sigma D) factor, at 3,079,129 to 3,080,970 _02937 Position (kb) 3077 3078 3079Strain fitness (log2 ratio) -2 -1 0 1 2at 3076.661 kb on - strandat 3076.716 kb on - strandat 3076.716 kb on - strandat 3076.716 kb on - strandat 3076.716 kb on - strandat 3076.716 kb on - strandat 3076.716 kb on - strandat 3076.716 kb on - strandat 3076.716 kb on - strandat 3076.716 kb on - strandat 3076.717 kb on + strandat 3076.717 kb on + strandat 3076.718 kb on - strandat 3076.732 kb on + strandat 3077.076 kb on + strandat 3077.076 kb on + strandat 3078.937 kb on + strandat 3078.945 kb on + strandat 3078.945 kb on + strandat 3079.003 kb on + strandat 3079.003 kb on + strandat 3079.003 kb on + strandat 3079.003 kb on + strandat 3079.003 kb on + strandat 3079.005 kb on + strandat 3079.005 kb on + strandat 3079.005 kb on + strandat 3079.005 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.007 kb on + strandat 3079.011 kb on + strandat 3079.011 kb on + strandat 3079.011 kb on + strandat 3079.011 kb on + strandat 3079.021 kb on + strandat 3079.021 kb on + strandat 3079.021 kb on + strandat 3079.021 kb on + strandat 3079.025 kb on + strandat 3079.025 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1263
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3,076,661 - -0.6
3,076,716 - -1.1
3,076,716 - +0.5
3,076,716 - +0.3
3,076,716 - +1.2
3,076,716 - +1.9
3,076,716 - -0.9
3,076,716 - -0.3
3,076,716 - +0.5
3,076,716 - -0.3
3,076,717 + -0.4
3,076,717 + -0.1
3,076,718 - -0.1
3,076,732 + +0.5
3,077,076 + +0.3
3,077,076 + -1.4
3,078,937 + -0.2
3,078,945 + +0.0
3,078,945 + -0.2
3,079,003 + +0.7
3,079,003 + -0.9
3,079,003 + -0.4
3,079,003 + -0.3
3,079,003 + +0.3
3,079,005 + +0.2
3,079,005 + +0.2
3,079,005 + -1.6
3,079,005 + +1.5
3,079,007 + -0.0
3,079,007 + -0.2
3,079,007 + -0.3
3,079,007 + +0.7
3,079,007 + -0.5
3,079,007 + -0.5
3,079,007 + -0.9
3,079,007 + -0.1
3,079,007 + -0.4
3,079,007 + -1.0
3,079,007 + -0.7
3,079,007 + -0.4
3,079,007 + +1.3
3,079,007 + -0.4
3,079,007 + -0.2
3,079,011 + -0.4
3,079,011 + -0.3
3,079,011 + +0.1
3,079,011 + +0.5
3,079,021 + +0.1
3,079,021 + -0.3
3,079,021 + -0.3
3,079,021 + +0.3
3,079,025 + -1.9
3,079,025 + +0.0

Or see this region's nucleotide sequence