Experiment: Laval1263
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02934 and ECD_02935 are separated by 237 nucleotides ECD_02935 and ECD_02936 are separated by 110 nucleotides ECD_02936 and ECD_02937 are separated by 194 nucleotides
ECD_02934: ECD_02934 - tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein, at 3,075,612 to 3,076,625
_02934
ECD_02935: ECD_02935 - 30S ribosomal subunit protein S21, at 3,076,863 to 3,077,078
_02935
ECD_02936: ECD_02936 - DNA primase, at 3,077,189 to 3,078,934
_02936
ECD_02937: ECD_02937 - RNA polymerase, sigma 70 (sigma D) factor, at 3,079,129 to 3,080,970
_02937
Position (kb)
3077
3078
3079 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3076.661 kb on - strand at 3076.716 kb on - strand at 3076.716 kb on - strand at 3076.716 kb on - strand at 3076.716 kb on - strand at 3076.716 kb on - strand at 3076.716 kb on - strand at 3076.716 kb on - strand at 3076.716 kb on - strand at 3076.716 kb on - strand at 3076.717 kb on + strand at 3076.717 kb on + strand at 3076.718 kb on - strand at 3076.732 kb on + strand at 3077.076 kb on + strand at 3077.076 kb on + strand at 3078.937 kb on + strand at 3078.945 kb on + strand at 3078.945 kb on + strand at 3079.003 kb on + strand at 3079.003 kb on + strand at 3079.003 kb on + strand at 3079.003 kb on + strand at 3079.003 kb on + strand at 3079.005 kb on + strand at 3079.005 kb on + strand at 3079.005 kb on + strand at 3079.005 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.007 kb on + strand at 3079.011 kb on + strand at 3079.011 kb on + strand at 3079.011 kb on + strand at 3079.011 kb on + strand at 3079.021 kb on + strand at 3079.021 kb on + strand at 3079.021 kb on + strand at 3079.021 kb on + strand at 3079.025 kb on + strand at 3079.025 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1263 remove 3,076,661 - -0.6 3,076,716 - -1.1 3,076,716 - +0.5 3,076,716 - +0.3 3,076,716 - +1.2 3,076,716 - +1.9 3,076,716 - -0.9 3,076,716 - -0.3 3,076,716 - +0.5 3,076,716 - -0.3 3,076,717 + -0.4 3,076,717 + -0.1 3,076,718 - -0.1 3,076,732 + +0.5 3,077,076 + +0.3 3,077,076 + -1.4 3,078,937 + -0.2 3,078,945 + +0.0 3,078,945 + -0.2 3,079,003 + +0.7 3,079,003 + -0.9 3,079,003 + -0.4 3,079,003 + -0.3 3,079,003 + +0.3 3,079,005 + +0.2 3,079,005 + +0.2 3,079,005 + -1.6 3,079,005 + +1.5 3,079,007 + -0.0 3,079,007 + -0.2 3,079,007 + -0.3 3,079,007 + +0.7 3,079,007 + -0.5 3,079,007 + -0.5 3,079,007 + -0.9 3,079,007 + -0.1 3,079,007 + -0.4 3,079,007 + -1.0 3,079,007 + -0.7 3,079,007 + -0.4 3,079,007 + +1.3 3,079,007 + -0.4 3,079,007 + -0.2 3,079,011 + -0.4 3,079,011 + -0.3 3,079,011 + +0.1 3,079,011 + +0.5 3,079,021 + +0.1 3,079,021 + -0.3 3,079,021 + -0.3 3,079,021 + +0.3 3,079,025 + -1.9 3,079,025 + +0.0
Or see this region's nucleotide sequence