Experiment: Laval1263
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01650 and ECD_01651 overlap by 26 nucleotides ECD_01651 and ECD_01652 are separated by 9 nucleotides ECD_01652 and ECD_01654 are separated by 547 nucleotides ECD_01654 and ECD_01655 are separated by 99 nucleotides
ECD_01650: ECD_01650 - component of SufBCD Fe-S cluster assembly scaffold, at 1,705,789 to 1,707,060
_01650
ECD_01651: ECD_01651 - SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein, at 1,707,035 to 1,707,781
_01651
ECD_01652: ECD_01652 - component of SufBCD complex, at 1,707,791 to 1,708,801
_01652
ECD_01654: ECD_01654 - uncharacterized protein, at 1,709,349 to 1,709,537
_01654
ECD_01655: ECD_01655 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, at 1,709,637 to 1,710,047
_01655
Position (kb) 1707
1708
1709 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1706.908 kb on - strand, within ECD_01650 at 1707.124 kb on - strand, within ECD_01651 at 1707.125 kb on + strand, within ECD_01651 at 1707.125 kb on + strand, within ECD_01651 at 1707.126 kb on - strand, within ECD_01651 at 1707.240 kb on - strand, within ECD_01651 at 1707.659 kb on - strand, within ECD_01651 at 1707.962 kb on - strand, within ECD_01652 at 1708.017 kb on + strand, within ECD_01652 at 1708.530 kb on + strand, within ECD_01652 at 1708.609 kb on - strand, within ECD_01652 at 1708.643 kb on - strand, within ECD_01652 at 1708.651 kb on - strand, within ECD_01652 at 1708.655 kb on - strand, within ECD_01652 at 1708.673 kb on + strand, within ECD_01652 at 1708.804 kb on - strand at 1708.831 kb on + strand at 1708.926 kb on + strand at 1708.927 kb on - strand at 1709.268 kb on + strand at 1709.537 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1263 remove 1,706,908 - ECD_01650 0.88 +0.5 1,707,124 - ECD_01651 0.12 +2.7 1,707,125 + ECD_01651 0.12 +0.4 1,707,125 + ECD_01651 0.12 -0.1 1,707,126 - ECD_01651 0.12 +0.9 1,707,240 - ECD_01651 0.27 -0.1 1,707,659 - ECD_01651 0.84 -0.5 1,707,962 - ECD_01652 0.17 +0.7 1,708,017 + ECD_01652 0.22 +1.0 1,708,530 + ECD_01652 0.73 +0.7 1,708,609 - ECD_01652 0.81 +0.9 1,708,643 - ECD_01652 0.84 -0.9 1,708,651 - ECD_01652 0.85 +0.1 1,708,655 - ECD_01652 0.85 -1.4 1,708,673 + ECD_01652 0.87 -0.4 1,708,804 - -2.9 1,708,831 + +0.1 1,708,926 + +0.4 1,708,927 - -0.7 1,709,268 + +0.2 1,709,537 + +0.7
Or see this region's nucleotide sequence