Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24675

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
4,699,198	+				-0.5
4,699,198	+				-0.2
4,699,198	+				-2.3
4,699,258	-				+2.1
4,699,258	-				-0.9
4,699,274	-				-0.9
4,699,274	-				+0.7
4,699,319	-				+0.7
4,699,319	-				+0.0
4,699,321	-				-1.2
4,699,335	-				+0.1
4,699,337	+				-0.6
4,699,577	-				-0.9
4,699,583	-				-0.3
4,699,583	-				-1.0
4,699,595	+				-1.2
4,699,728	-				+0.3
4,700,079	-		LU632_RS24675	0.12	-1.1
4,700,447	+				+0.5