Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23735

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
4,527,894	-		LU632_RS23730	0.61	+2.2
4,527,894	-		LU632_RS23730	0.61	+0.3
4,527,899	-		LU632_RS23730	0.61	-0.0
4,527,899	-		LU632_RS23730	0.61	+0.1
4,528,120	+		LU632_RS23730	0.72	-1.1
4,528,123	-		LU632_RS23730	0.73	-0.2
4,528,142	+		LU632_RS23730	0.74	-1.0
4,528,143	-		LU632_RS23730	0.74	+2.6
4,528,169	+		LU632_RS23730	0.75	-2.1
4,528,170	-		LU632_RS23730	0.75	+0.2
4,528,200	+		LU632_RS23730	0.77	+0.4
4,528,200	+		LU632_RS23730	0.77	+0.5
4,528,300	+		LU632_RS23730	0.82	-0.6
4,528,301	-		LU632_RS23730	0.82	+2.6
4,528,331	+		LU632_RS23730	0.83	-1.3
4,528,332	+		LU632_RS23730	0.83	+2.1
4,528,375	-		LU632_RS23730	0.86	-0.1
4,528,443	-		LU632_RS23730	0.89	-2.2
4,528,443	-		LU632_RS23730	0.89	-0.4
4,529,006	-		LU632_RS23735	0.41	-0.2
4,529,006	-		LU632_RS23735	0.41	-1.4
4,529,116	+		LU632_RS23735	0.63	-0.0
4,529,274	+				+0.5
4,529,459	+				+1.0