Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20270

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
3,853,679	+				+0.7
3,853,693	+				-0.7
3,853,694	-				-0.0
3,853,694	-				-1.6
3,853,882	+				+0.6
3,853,912	+				+0.5
3,853,912	+				-0.7
3,853,913	-				-0.5
3,853,920	+				+0.3
3,854,185	+				-0.2
3,854,185	+				-1.6
3,854,189	+				-1.9
3,854,189	+				+0.3
3,854,190	-				+2.0
3,854,190	-				+0.7
3,854,190	-				-0.4
3,854,289	+				-0.8
3,854,333	+				+0.4
3,854,439	-				-0.1
3,854,454	-				+1.6
3,854,546	-				-0.1
3,854,581	+				+0.1
3,854,634	-				-0.1
3,854,637	+				+0.2
3,854,638	-				+0.4
3,854,638	-				+1.0
3,854,674	+				-0.0
3,854,674	+				-0.9
3,854,772	-		LU632_RS20270	0.13	-1.6
3,855,860	-				+0.5
3,855,924	+				-0.2
3,855,928	+				-1.0
3,855,929	-				+1.0
3,855,945	-				+0.7
3,855,948	-				-0.6
3,855,948	-				+0.5
3,855,953	-				-0.6
3,856,056	+				+0.4
3,856,125	+				-0.1
3,856,262	+				-0.8
3,856,264	+				+1.1