Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16855

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
3,175,059	+				-1.6
3,175,106	+				+0.7
3,175,107	-				-0.2
3,175,317	+		LU632_RS16850	0.44	-2.3
3,175,317	+		LU632_RS16850	0.44	+1.0
3,175,317	+		LU632_RS16850	0.44	-0.4
3,175,318	-		LU632_RS16850	0.45	+7.6
3,175,318	-		LU632_RS16850	0.45	-0.2
3,175,371	-		LU632_RS16850	0.72	+0.6
3,176,388	-		LU632_RS16855	0.84	-0.9