Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15405

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
2,918,101	+		LU632_RS15405	0.58	-0.7
2,918,116	-		LU632_RS15405	0.60	-0.9
2,918,408	+				+0.9
2,918,487	-				+1.4
2,918,489	-				-0.7
2,918,503	-				-0.0
2,918,513	+				+0.5
2,918,524	+				-0.1
2,919,152	-	rseB	LU632_RS15415	0.17	-0.7
2,919,253	+	rseB	LU632_RS15415	0.28	+0.3
2,919,254	-	rseB	LU632_RS15415	0.28	-1.0
2,919,353	+	rseB	LU632_RS15415	0.38	+0.3
2,919,390	-	rseB	LU632_RS15415	0.42	-0.7