Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15375

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
2,910,805	-				-0.5
2,910,886	-				-0.4
2,910,886	-				-0.7
2,910,905	-	recO	LU632_RS15375	0.12	-0.4
2,910,912	-	recO	LU632_RS15375	0.13	+0.6
2,911,018	-	recO	LU632_RS15375	0.27	-0.2
2,911,024	-	recO	LU632_RS15375	0.28	+0.2
2,911,024	-	recO	LU632_RS15375	0.28	+0.9
2,911,060	+	recO	LU632_RS15375	0.33	-0.7
2,911,061	-	recO	LU632_RS15375	0.33	-0.2
2,911,061	-	recO	LU632_RS15375	0.33	+0.7
2,911,079	+	recO	LU632_RS15375	0.36	-0.2
2,911,079	+	recO	LU632_RS15375	0.36	+0.9
2,911,208	-	recO	LU632_RS15375	0.53	-0.7
2,911,213	+	recO	LU632_RS15375	0.54	+0.0
2,911,279	+	recO	LU632_RS15375	0.63	-0.2
2,911,279	+	recO	LU632_RS15375	0.63	-0.2
2,911,280	-	recO	LU632_RS15375	0.63	-1.8
2,911,328	+	recO	LU632_RS15375	0.70	-1.5
2,911,328	+	recO	LU632_RS15375	0.70	+0.3
2,911,328	+	recO	LU632_RS15375	0.70	+0.9
2,911,568	-				+0.2