Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14890

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
2,832,284	+		LU632_RS14885	0.62	-0.5
2,832,346	+		LU632_RS14885	0.67	-0.5
2,832,347	-		LU632_RS14885	0.67	-1.5
2,832,380	+		LU632_RS14885	0.69	+4.6
2,832,474	+		LU632_RS14885	0.75	-0.2
2,832,519	+		LU632_RS14885	0.78	+2.5
2,832,585	+		LU632_RS14885	0.83	+0.1
2,832,586	-		LU632_RS14885	0.83	-0.5
2,832,629	+		LU632_RS14885	0.86	-1.0
2,832,709	+				-1.2
2,832,710	-				-0.0
2,832,800	+				-1.0
2,832,800	+				+0.5
2,832,800	+				-1.3
2,832,800	+				-0.6
2,832,800	+				+0.3
2,832,801	-				+0.2
2,832,805	-				+1.1
2,833,030	+				+4.6
2,833,107	-				+0.3
2,833,191	+				-2.3
2,833,577	+				-0.7
2,833,577	+				-1.3
2,833,577	+				+1.0
2,834,192	-		LU632_RS14895	0.57	-0.5