Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09795

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
1,863,939	+				+0.7
1,863,940	-				-0.6
1,863,940	-				-0.8
1,863,990	+				-0.4
1,863,992	+				-2.1
1,863,993	-				-0.4
1,864,010	+				-1.1
1,864,044	+				-1.7
1,864,164	+	aroA	LU632_RS09795	0.12	-1.3
1,864,172	-	aroA	LU632_RS09795	0.12	-0.7
1,864,191	+	aroA	LU632_RS09795	0.14	+2.0
1,864,230	+	aroA	LU632_RS09795	0.17	-2.5
1,864,231	-	aroA	LU632_RS09795	0.17	-2.5
1,864,435	-	aroA	LU632_RS09795	0.33	-1.0
1,864,440	-	aroA	LU632_RS09795	0.33	-0.7
1,864,457	+	aroA	LU632_RS09795	0.34	-0.7
1,864,582	-	aroA	LU632_RS09795	0.44	-0.5
1,864,633	+	aroA	LU632_RS09795	0.48	-0.3
1,864,780	+	aroA	LU632_RS09795	0.60	+0.3
1,864,800	+	aroA	LU632_RS09795	0.61	+2.9
1,864,816	+	aroA	LU632_RS09795	0.62	-0.1
1,864,817	-	aroA	LU632_RS09795	0.62	-0.5
1,864,819	+	aroA	LU632_RS09795	0.63	+0.3
1,864,819	+	aroA	LU632_RS09795	0.63	+1.3
1,864,820	-	aroA	LU632_RS09795	0.63	-0.9
1,864,822	+	aroA	LU632_RS09795	0.63	-2.6
1,864,822	+	aroA	LU632_RS09795	0.63	+0.3
1,864,822	+	aroA	LU632_RS09795	0.63	-3.1
1,864,822	+	aroA	LU632_RS09795	0.63	-0.7
1,864,822	+	aroA	LU632_RS09795	0.63	-1.5
1,864,823	-	aroA	LU632_RS09795	0.63	-2.0
1,864,892	+	aroA	LU632_RS09795	0.68	+0.7
1,864,892	+	aroA	LU632_RS09795	0.68	-0.9
1,864,892	+	aroA	LU632_RS09795	0.68	-0.7
1,864,892	+	aroA	LU632_RS09795	0.68	-1.2
1,864,892	+	aroA	LU632_RS09795	0.68	-0.0
1,864,893	-	aroA	LU632_RS09795	0.68	+0.5
1,864,895	-	aroA	LU632_RS09795	0.69	-0.3
1,864,914	+	aroA	LU632_RS09795	0.70	-1.4
1,864,915	-	aroA	LU632_RS09795	0.70	-1.3
1,864,915	-	aroA	LU632_RS09795	0.70	-1.7
1,864,945	+	aroA	LU632_RS09795	0.72	+1.3
1,864,966	+	aroA	LU632_RS09795	0.74	-1.9
1,864,967	-	aroA	LU632_RS09795	0.74	-1.3
1,865,015	-	aroA	LU632_RS09795	0.78	-0.7
1,865,019	-	aroA	LU632_RS09795	0.78	+0.3
1,865,019	-	aroA	LU632_RS09795	0.78	-0.3
1,865,070	+	aroA	LU632_RS09795	0.82	-1.0
1,865,074	+	aroA	LU632_RS09795	0.82	-2.3
1,865,075	-	aroA	LU632_RS09795	0.83	-0.3
1,865,075	-	aroA	LU632_RS09795	0.83	+1.9
1,865,091	+	aroA	LU632_RS09795	0.84	-0.7
1,865,108	+	aroA	LU632_RS09795	0.85	-0.3
1,865,108	+	aroA	LU632_RS09795	0.85	-1.0
1,865,108	+	aroA	LU632_RS09795	0.85	-1.3
1,865,109	-	aroA	LU632_RS09795	0.85	-1.0
1,865,109	-	aroA	LU632_RS09795	0.85	+1.3
1,865,109	-	aroA	LU632_RS09795	0.85	+2.1
1,865,112	+	aroA	LU632_RS09795	0.85	-1.5
1,865,112	+	aroA	LU632_RS09795	0.85	-1.7
1,865,112	+	aroA	LU632_RS09795	0.85	-1.5
1,865,112	+	aroA	LU632_RS09795	0.85	-1.1
1,865,112	+	aroA	LU632_RS09795	0.85	-1.0
1,865,112	+	aroA	LU632_RS09795	0.85	+1.3
1,865,113	-	aroA	LU632_RS09795	0.85	+1.3
1,865,113	-	aroA	LU632_RS09795	0.85	-2.0
1,865,160	-	aroA	LU632_RS09795	0.89	-0.9
1,865,274	+				-0.7
1,865,362	+				+0.5
1,865,373	+				-0.6
1,865,395	-				-1.4
1,865,424	-				-0.6
1,865,424	-				-0.5
1,865,424	-				+0.4
1,865,426	-				-0.3
1,865,434	+				+1.6
1,865,434	+				+0.1
1,865,438	+				-1.9
1,865,438	+				+2.6
1,865,438	+				-0.5
1,866,162	+				-0.1
1,866,162	+				-0.3
1,866,166	+				-0.0
1,866,166	+				-0.4
1,866,166	+				-1.7
1,866,166	+				+1.4
1,866,166	+				-0.7
1,866,176	+				-0.4