Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07440

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
1,403,575	-				+0.5
1,403,678	+				-1.1
1,403,687	+				+0.4
1,403,687	+				+1.2
1,403,691	+				+0.1
1,403,693	+				-1.4
1,403,693	+				+0.9
1,403,741	-				+1.1
1,404,023	+		LU632_RS07440	0.43	-1.9
1,404,044	+		LU632_RS07440	0.48	+0.1
1,404,078	-		LU632_RS07440	0.57	-1.4
1,404,082	-		LU632_RS07440	0.59	-2.5
1,404,086	+		LU632_RS07440	0.60	-0.2
1,404,087	-		LU632_RS07440	0.60	-0.9
1,404,226	+				+0.9