Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS01830

Experiment: plant=Squash; plant sample=QP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP3; plant location=NA
350,994	+				-1.5
351,126	+				-0.6
351,128	+				+0.5
351,128	+				+0.2
351,128	+				-0.8
351,129	-				+1.0
351,129	-				-0.4
351,129	-				+0.7
351,129	-				+0.0
351,129	-				-1.8
351,168	-				-1.5
351,168	-				+3.6
351,168	-				-0.4
351,802	-		LU632_RS01825	0.76	+1.3
351,802	-		LU632_RS01825	0.76	-0.8
352,702	+				-0.2
352,747	+				+0.0
352,748	-				+3.2
352,775	+				+1.0
352,775	+				+0.6
352,775	+				+0.8
352,776	-				-2.7
352,778	-				+0.7
352,778	-				-0.5
352,788	+				+0.1
353,585	-				-0.3
353,593	+				-1.3
353,593	+				+0.3
353,601	+				-1.3
353,601	+				+0.4
353,602	-				-0.8
353,602	-				-0.5
353,602	-				+0.0
353,602	-				+0.5
353,602	-				+0.1
353,602	-				+0.0
353,605	+				-0.6
353,676	-				-1.4