Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00400

Experiment: plant=Squash; plant sample=QP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP2; plant location=NA
83,718	-		LU632_RS00395	0.75	-0.0
83,815	-		LU632_RS00395	0.80	-0.4
83,859	+		LU632_RS00395	0.82	+1.1
83,859	+		LU632_RS00395	0.82	-1.5
83,879	+		LU632_RS00395	0.83	-0.1
83,879	+		LU632_RS00395	0.83	-0.9
83,880	-		LU632_RS00395	0.83	-0.1
83,939	+		LU632_RS00395	0.86	-0.1
83,939	+		LU632_RS00395	0.86	-1.8
83,942	+		LU632_RS00395	0.86	+0.4
83,943	-		LU632_RS00395	0.86	-0.5
83,943	-		LU632_RS00395	0.86	-1.5
83,946	-		LU632_RS00395	0.86	+1.0
83,957	+		LU632_RS00395	0.87	-2.4
84,013	+		LU632_RS00395	0.89	-0.9
84,016	+		LU632_RS00395	0.90	-1.8
84,017	-		LU632_RS00395	0.90	-1.5
84,038	+				+1.8
84,038	+				+1.1
84,039	-				+2.0
84,172	+				-0.5
84,174	-				-0.1
84,256	-				-0.3
84,310	+				-1.6
84,310	+				-0.3
84,310	+				+0.7
84,310	+				-0.1
84,311	-				-1.4
84,311	-				+1.3
84,327	+				-0.2
84,327	+				+1.4
84,327	+				+0.3
84,328	-				-0.3
84,487	+				+2.0
84,494	+				+0.1
84,495	-				+0.8
84,531	-				+3.1
84,556	+				-0.9
84,603	+				-0.2
84,605	+				+0.1
84,680	-				-0.8
84,900	+		LU632_RS00400	0.27	-2.5
85,510	+				+0.7