Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21310

Experiment: plant=Squash; plant sample=QP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP1; plant location=NA
4,067,260	+	mtgA	LU632_RS21305	0.75	-1.2
4,067,261	-	mtgA	LU632_RS21305	0.75	+0.5
4,067,361	+	mtgA	LU632_RS21305	0.89	-0.2
4,067,438	+				+3.3
4,067,473	+				+0.4
4,067,574	+				+0.9
4,067,574	+				+0.7
4,067,575	-				+0.8
4,067,639	+				+0.1
4,067,640	-				+0.8
4,067,641	+				-2.0
4,067,792	+				+0.7
4,067,792	+				+0.6
4,067,793	-				-1.5
4,067,796	-				+2.3
4,068,094	+				-3.1
4,068,108	-				-0.6
4,068,169	+				-0.1
4,068,169	+				+1.6
4,068,170	-				+1.9
4,068,170	-				+0.7
4,068,189	-				+2.5
4,068,192	-				+0.9
4,068,205	-				+5.3
4,068,212	-				+0.9
4,068,228	+				+0.6
4,068,341	-				-1.0
4,070,676	-				+0.7
4,070,731	+				+0.8
4,070,732	-				-0.1
4,070,732	-				-1.7
4,070,805	-				+1.1
4,070,826	+				+0.5
4,070,826	+				+1.7
4,070,827	-				+0.7
4,070,831	+				+4.5
4,071,014	-				+1.3
4,071,017	+				-0.2
4,071,041	-				+0.2
4,071,044	-				-2.5
4,071,050	-				-0.2
4,071,050	-				-2.5
4,071,220	-				-0.1
4,071,332	-				-1.7
4,071,356	+				+0.5
4,071,533	-				-0.1
4,071,537	-				-1.8
4,071,537	-				-1.7
4,071,537	-				-0.7
4,071,561	+				+0.3
4,071,606	+				-1.0
4,071,607	-				+0.1
4,071,607	-				-1.2
4,071,607	-				-1.1