Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21020

Experiment: plant=Squash; plant sample=QP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP1; plant location=NA
4,015,036	+		LU632_RS21010	0.53	+1.2
4,015,080	+		LU632_RS21010	0.57	-1.2
4,015,156	+		LU632_RS21010	0.66	-1.0
4,015,352	-		LU632_RS21010	0.88	+1.0
4,015,417	+				+0.8
4,015,418	-				+1.0
4,015,418	-				+0.7
4,015,471	-				-0.5
4,015,471	-				-2.0
4,017,061	-				+0.5
4,017,744	+				-0.7
4,017,767	+				+0.8
4,017,790	-				-0.2
4,017,793	-				-0.8
4,017,793	-				-0.9
4,017,795	+				+0.7
4,017,795	+				-0.6
4,017,795	+				-0.9
4,017,815	+				+1.0
4,017,815	+				-1.3
4,017,816	-				+0.4
4,017,816	-				+0.4
4,017,816	-				+0.4
4,017,816	-				+0.1
4,017,816	-				+1.6
4,017,816	-				+2.0
4,017,816	-				+2.0