Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17340

Experiment: plant=Squash; plant sample=QP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP1; plant location=NA
3,259,597	-				-0.6
3,259,597	-				-0.1
3,259,944	+		LU632_RS17340	0.64	-1.2
3,259,944	+		LU632_RS17340	0.64	-1.6
3,259,944	+		LU632_RS17340	0.64	-1.3
3,259,946	+		LU632_RS17340	0.65	-0.3
3,259,946	+		LU632_RS17340	0.65	+1.0
3,259,946	+		LU632_RS17340	0.65	+0.2
3,259,946	+		LU632_RS17340	0.65	+1.8
3,259,946	+		LU632_RS17340	0.65	-1.0
3,260,037	-				-0.0
3,260,037	-				+0.3