Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17190

Experiment: plant=Squash; plant sample=QP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP1; plant location=NA
3,234,094	+				+3.7
3,234,094	+				-0.8
3,234,143	-				-0.0
3,234,166	+				+2.8
3,234,212	+				-0.7
3,234,213	-				+2.8
3,234,340	+		LU632_RS17185	0.29	-1.2
3,234,341	-		LU632_RS17185	0.29	-1.1
3,234,360	+		LU632_RS17185	0.32	+2.3
3,234,361	-		LU632_RS17185	0.32	+1.6
3,234,361	-		LU632_RS17185	0.32	+5.2
3,234,431	-		LU632_RS17185	0.44	+1.2
3,234,560	+		LU632_RS17185	0.65	+2.0
3,234,561	-		LU632_RS17185	0.65	-0.4
3,234,597	-		LU632_RS17185	0.71	+1.0
3,234,887	+				+0.6
3,234,888	-				+0.5
3,234,890	-				+1.6
3,234,953	+				-0.8
3,234,953	+				+1.2
3,234,953	+				-0.3
3,234,954	-				+0.8
3,234,954	-				+1.1
3,234,956	-				+0.8
3,234,974	+				-0.2
3,234,975	-				+0.0