Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14230

Experiment: plant=Squash; plant sample=QP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP1; plant location=NA
2,726,859	-				-0.4
2,726,907	+				+0.6
2,726,910	-				+0.1
2,726,910	-				-0.9
2,726,910	-				+0.4
2,726,910	-				-1.0
2,726,910	-				-1.2
2,726,910	-				-1.4
2,726,910	-				-0.6
2,727,169	-		LU632_RS14225	0.40	-0.3
2,728,243	-		LU632_RS14235	0.84	-0.4
2,728,584	+		LU632_RS14240	0.40	-1.0
2,728,584	+		LU632_RS14240	0.40	+0.1
2,728,835	+		LU632_RS14240	0.76	-1.2
2,728,835	+		LU632_RS14240	0.76	+0.5
2,728,848	+		LU632_RS14240	0.78	+0.5