Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10070

Experiment: plant=Squash; plant sample=QP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP1; plant location=NA
1,928,146	+				+1.7
1,928,156	+				+1.5
1,928,224	+		LU632_RS10070	0.29	-0.4
1,928,225	-		LU632_RS10070	0.29	-1.4
1,928,228	-		LU632_RS10070	0.31	+3.9
1,928,263	+		LU632_RS10070	0.49	+0.7
1,928,268	+		LU632_RS10070	0.52	+2.2
1,928,329	-		LU632_RS10070	0.84	+1.1
1,928,555	-				-1.1
1,928,555	-				+0.1
1,929,284	-				-0.6
1,929,313	+				+1.2
1,929,313	+				+0.1
1,929,313	+				+2.1
1,929,313	+				+0.7
1,929,339	+				-2.4