Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05830

Experiment: plant=Squash; plant sample=QP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Squash; plant sample=QP1; plant location=NA
1,107,821	-				-0.8
1,107,873	+		LU632_RS05835	0.23	+1.3
1,108,039	+		LU632_RS05835	0.66	-0.8
1,108,040	-		LU632_RS05835	0.66	-1.6
1,108,048	+		LU632_RS05835	0.68	+0.1
1,108,066	+		LU632_RS05835	0.73	+0.6
1,108,155	+				-1.0
1,108,158	+				+2.3
1,108,167	-				-0.3
1,108,235	-				-0.8
1,108,254	+				-1.1
1,108,279	+				-1.1
1,108,279	+				-0.6
1,108,291	-				+1.3
1,108,291	-				-0.8
1,108,327	+				-0.6