Experiment: Bas41
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03296 and ECD_03297 are separated by 119 nucleotides ECD_03297 and ECD_03298 overlap by 14 nucleotides ECD_03298 and ECD_03299 overlap by 4 nucleotides
ECD_03296: ECD_03296 - gamma-glutamyltranspeptidase, at 3,447,453 to 3,449,195
_03296
ECD_03297: ECD_03297 - DUF2756 family protein, at 3,449,315 to 3,449,755
_03297
ECD_03298: ECD_03298 - glycerophosphodiester phosphodiesterase, cytosolic, at 3,449,742 to 3,450,485
_03298
ECD_03299: ECD_03299 - sn-glycerol-3-phosphate ABC transporter ATPase, at 3,450,482 to 3,451,552
_03299
Position (kb)
3449
3450
3451 Strain fitness (log2 ratio)
-2
-1
0
1 at 3448.823 kb on + strand, within ECD_03296 at 3449.046 kb on + strand at 3449.047 kb on - strand at 3449.095 kb on + strand at 3449.095 kb on + strand at 3449.096 kb on - strand at 3449.230 kb on + strand at 3449.230 kb on + strand at 3449.230 kb on + strand at 3449.231 kb on - strand at 3449.239 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.242 kb on - strand at 3449.242 kb on - strand at 3449.243 kb on + strand at 3449.243 kb on + strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.254 kb on + strand at 3449.254 kb on + strand at 3449.310 kb on - strand at 3449.374 kb on + strand, within ECD_03297 at 3449.375 kb on - strand, within ECD_03297 at 3449.375 kb on - strand, within ECD_03297 at 3449.377 kb on + strand, within ECD_03297 at 3449.533 kb on - strand, within ECD_03297 at 3449.539 kb on + strand, within ECD_03297 at 3449.540 kb on - strand, within ECD_03297 at 3449.540 kb on - strand, within ECD_03297 at 3449.648 kb on - strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.669 kb on - strand, within ECD_03297 at 3449.669 kb on - strand, within ECD_03297 at 3449.786 kb on + strand at 3449.846 kb on + strand, within ECD_03298 at 3449.849 kb on - strand, within ECD_03298 at 3449.849 kb on - strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.924 kb on + strand, within ECD_03298 at 3449.924 kb on + strand, within ECD_03298 at 3450.069 kb on - strand, within ECD_03298 at 3450.258 kb on + strand, within ECD_03298 at 3450.380 kb on + strand, within ECD_03298 at 3450.381 kb on - strand, within ECD_03298 at 3450.479 kb on + strand at 3450.479 kb on + strand at 3450.479 kb on + strand at 3450.480 kb on - strand at 3450.480 kb on - strand at 3450.480 kb on - strand at 3450.480 kb on - strand at 3450.480 kb on - strand at 3450.701 kb on - strand, within ECD_03299 at 3450.701 kb on - strand, within ECD_03299 at 3450.741 kb on + strand, within ECD_03299 at 3450.750 kb on + strand, within ECD_03299 at 3450.808 kb on + strand, within ECD_03299 at 3450.885 kb on + strand, within ECD_03299 at 3450.886 kb on - strand, within ECD_03299 at 3450.939 kb on - strand, within ECD_03299 at 3450.980 kb on - strand, within ECD_03299 at 3451.282 kb on + strand, within ECD_03299
Per-strain Table
Position Strand Gene LocusTag Fraction Bas41 remove 3,448,823 + ECD_03296 0.79 -0.1 3,449,046 + -0.5 3,449,047 - -2.7 3,449,095 + +0.1 3,449,095 + +1.5 3,449,096 - +0.7 3,449,230 + +0.2 3,449,230 + +0.5 3,449,230 + -0.8 3,449,231 - -0.5 3,449,239 + +0.2 3,449,241 + +0.3 3,449,241 + -0.2 3,449,241 + -0.9 3,449,241 + +0.4 3,449,241 + -0.8 3,449,242 - +0.2 3,449,242 - +0.0 3,449,243 + -0.2 3,449,243 + +0.1 3,449,244 - +0.1 3,449,244 - +0.1 3,449,244 - +0.0 3,449,244 - +0.9 3,449,254 + +0.1 3,449,254 + -0.0 3,449,310 - +0.2 3,449,374 + ECD_03297 0.13 -0.1 3,449,375 - ECD_03297 0.14 +0.3 3,449,375 - ECD_03297 0.14 -0.2 3,449,377 + ECD_03297 0.14 -1.0 3,449,533 - ECD_03297 0.49 -0.1 3,449,539 + ECD_03297 0.51 -0.1 3,449,540 - ECD_03297 0.51 -0.4 3,449,540 - ECD_03297 0.51 +0.2 3,449,648 - ECD_03297 0.76 +0.2 3,449,668 + ECD_03297 0.80 +0.5 3,449,668 + ECD_03297 0.80 +0.4 3,449,668 + ECD_03297 0.80 -0.3 3,449,669 - ECD_03297 0.80 -0.1 3,449,669 - ECD_03297 0.80 +1.1 3,449,786 + +0.5 3,449,846 + ECD_03298 0.14 +1.5 3,449,849 - ECD_03298 0.14 -0.0 3,449,849 - ECD_03298 0.14 +0.7 3,449,909 + ECD_03298 0.22 +1.2 3,449,909 + ECD_03298 0.22 +1.2 3,449,909 + ECD_03298 0.22 +0.5 3,449,909 + ECD_03298 0.22 -0.4 3,449,910 - ECD_03298 0.23 -0.2 3,449,910 - ECD_03298 0.23 +0.2 3,449,910 - ECD_03298 0.23 -0.7 3,449,924 + ECD_03298 0.24 +0.6 3,449,924 + ECD_03298 0.24 +0.2 3,450,069 - ECD_03298 0.44 +0.1 3,450,258 + ECD_03298 0.69 +0.6 3,450,380 + ECD_03298 0.86 -0.2 3,450,381 - ECD_03298 0.86 +0.0 3,450,479 + -0.6 3,450,479 + +0.7 3,450,479 + +0.3 3,450,480 - -0.7 3,450,480 - -0.3 3,450,480 - +0.3 3,450,480 - +0.1 3,450,480 - -0.1 3,450,701 - ECD_03299 0.20 +0.9 3,450,701 - ECD_03299 0.20 -0.0 3,450,741 + ECD_03299 0.24 -0.3 3,450,750 + ECD_03299 0.25 -0.7 3,450,808 + ECD_03299 0.30 +0.8 3,450,885 + ECD_03299 0.38 -0.1 3,450,886 - ECD_03299 0.38 +0.6 3,450,939 - ECD_03299 0.43 +0.2 3,450,980 - ECD_03299 0.46 +0.5 3,451,282 + ECD_03299 0.75 +1.6
Or see this region's nucleotide sequence