Strain Fitness in Escherichia coli BL21 around ECD_02589

Experiment: Bas41

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02587 and ECD_02588 overlap by 4 nucleotidesECD_02588 and ECD_02589 are separated by 4 nucleotidesECD_02589 and ECD_02590 are separated by 88 nucleotides ECD_02587: ECD_02587 - FliA-regulated DUF1537 family protein, at 2,702,302 to 2,703,564 _02587 ECD_02588: ECD_02588 - putative class II aldolase, at 2,703,561 to 2,704,199 _02588 ECD_02589: ECD_02589 - putative hydroxypyruvate isomerase, at 2,704,204 to 2,704,980 _02589 ECD_02590: ECD_02590 - putative transporter, at 2,705,069 to 2,706,433 _02590 Position (kb) 2704 2705Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2703.221 kb on + strand, within ECD_02587at 2703.221 kb on + strand, within ECD_02587at 2703.283 kb on + strand, within ECD_02587at 2703.284 kb on - strand, within ECD_02587at 2703.284 kb on - strand, within ECD_02587at 2703.284 kb on - strand, within ECD_02587at 2703.312 kb on - strand, within ECD_02587at 2703.332 kb on + strand, within ECD_02587at 2703.369 kb on + strand, within ECD_02587at 2703.398 kb on + strand, within ECD_02587at 2703.480 kb on + strandat 2703.480 kb on + strandat 2703.501 kb on + strandat 2703.502 kb on - strandat 2703.558 kb on - strandat 2703.580 kb on + strandat 2703.580 kb on + strandat 2703.580 kb on + strandat 2703.581 kb on - strandat 2703.676 kb on + strand, within ECD_02588at 2703.676 kb on + strand, within ECD_02588at 2703.772 kb on + strand, within ECD_02588at 2703.772 kb on + strand, within ECD_02588at 2703.772 kb on + strand, within ECD_02588at 2703.773 kb on - strand, within ECD_02588at 2703.773 kb on - strand, within ECD_02588at 2703.773 kb on - strand, within ECD_02588at 2703.839 kb on + strand, within ECD_02588at 2703.840 kb on - strand, within ECD_02588at 2703.933 kb on + strand, within ECD_02588at 2703.933 kb on + strand, within ECD_02588at 2703.933 kb on + strand, within ECD_02588at 2703.933 kb on + strand, within ECD_02588at 2703.933 kb on + strand, within ECD_02588at 2703.934 kb on - strand, within ECD_02588at 2703.934 kb on - strand, within ECD_02588at 2703.934 kb on - strand, within ECD_02588at 2703.972 kb on + strand, within ECD_02588at 2703.972 kb on + strand, within ECD_02588at 2703.973 kb on - strand, within ECD_02588at 2703.973 kb on - strand, within ECD_02588at 2703.973 kb on - strand, within ECD_02588at 2703.973 kb on - strand, within ECD_02588at 2704.161 kb on + strandat 2704.197 kb on + strandat 2704.197 kb on + strandat 2704.197 kb on + strandat 2704.222 kb on - strandat 2704.222 kb on - strandat 2704.222 kb on - strandat 2704.254 kb on + strandat 2704.254 kb on + strandat 2704.254 kb on + strandat 2704.254 kb on + strandat 2704.254 kb on + strandat 2704.321 kb on + strand, within ECD_02589at 2704.321 kb on + strand, within ECD_02589at 2704.321 kb on + strand, within ECD_02589at 2704.321 kb on + strand, within ECD_02589at 2704.399 kb on - strand, within ECD_02589at 2704.401 kb on + strand, within ECD_02589at 2704.401 kb on + strand, within ECD_02589at 2704.401 kb on + strand, within ECD_02589at 2704.401 kb on + strand, within ECD_02589at 2704.480 kb on + strand, within ECD_02589at 2704.480 kb on + strand, within ECD_02589at 2704.480 kb on + strand, within ECD_02589at 2704.481 kb on - strand, within ECD_02589at 2704.481 kb on - strand, within ECD_02589at 2704.565 kb on + strand, within ECD_02589at 2704.566 kb on - strand, within ECD_02589at 2704.569 kb on + strand, within ECD_02589at 2704.569 kb on + strand, within ECD_02589at 2704.575 kb on + strand, within ECD_02589at 2704.623 kb on - strand, within ECD_02589at 2704.625 kb on + strand, within ECD_02589at 2704.625 kb on + strand, within ECD_02589at 2704.625 kb on + strand, within ECD_02589at 2704.625 kb on + strand, within ECD_02589at 2704.626 kb on - strand, within ECD_02589at 2704.626 kb on - strand, within ECD_02589at 2704.626 kb on - strand, within ECD_02589at 2704.626 kb on - strand, within ECD_02589at 2704.660 kb on + strand, within ECD_02589at 2704.660 kb on + strand, within ECD_02589at 2704.660 kb on + strand, within ECD_02589at 2704.661 kb on - strand, within ECD_02589at 2704.661 kb on - strand, within ECD_02589at 2704.726 kb on - strand, within ECD_02589at 2704.733 kb on + strand, within ECD_02589at 2704.737 kb on + strand, within ECD_02589at 2704.737 kb on + strand, within ECD_02589at 2704.757 kb on + strand, within ECD_02589at 2704.757 kb on + strand, within ECD_02589at 2704.789 kb on + strand, within ECD_02589at 2704.801 kb on + strand, within ECD_02589at 2704.802 kb on - strand, within ECD_02589at 2704.811 kb on + strand, within ECD_02589at 2704.812 kb on - strand, within ECD_02589at 2704.826 kb on + strand, within ECD_02589at 2704.827 kb on - strand, within ECD_02589at 2704.827 kb on - strand, within ECD_02589at 2704.827 kb on - strand, within ECD_02589at 2704.865 kb on - strand, within ECD_02589at 2704.865 kb on - strand, within ECD_02589at 2704.926 kb on + strandat 2704.926 kb on + strandat 2704.927 kb on - strandat 2704.927 kb on - strandat 2704.978 kb on + strandat 2704.994 kb on + strandat 2704.998 kb on + strandat 2704.998 kb on + strandat 2704.998 kb on + strandat 2704.998 kb on + strandat 2704.998 kb on + strandat 2704.999 kb on - strandat 2705.005 kb on + strandat 2705.006 kb on - strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.011 kb on + strandat 2705.012 kb on - strandat 2705.012 kb on - strandat 2705.012 kb on - strandat 2705.012 kb on - strandat 2705.012 kb on - strandat 2705.012 kb on - strandat 2705.025 kb on + strandat 2705.025 kb on + strandat 2705.025 kb on + strandat 2705.037 kb on - strandat 2705.041 kb on + strandat 2705.042 kb on - strandat 2705.045 kb on + strandat 2705.046 kb on - strandat 2705.046 kb on - strandat 2705.046 kb on - strandat 2705.046 kb on - strandat 2705.046 kb on - strandat 2705.046 kb on - strandat 2705.047 kb on + strandat 2705.080 kb on + strandat 2705.080 kb on + strandat 2705.080 kb on + strandat 2705.080 kb on + strandat 2705.080 kb on + strandat 2705.080 kb on + strandat 2705.080 kb on + strandat 2705.088 kb on + strandat 2705.088 kb on + strandat 2705.088 kb on + strandat 2705.109 kb on + strandat 2705.109 kb on + strandat 2705.145 kb on + strandat 2705.145 kb on + strandat 2705.145 kb on + strandat 2705.145 kb on + strandat 2705.146 kb on - strandat 2705.146 kb on - strandat 2705.181 kb on + strandat 2705.181 kb on + strandat 2705.200 kb on + strandat 2705.267 kb on - strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.269 kb on + strand, within ECD_02590at 2705.270 kb on - strand, within ECD_02590at 2705.270 kb on - strand, within ECD_02590at 2705.270 kb on - strand, within ECD_02590at 2705.270 kb on - strand, within ECD_02590at 2705.270 kb on - strand, within ECD_02590at 2705.299 kb on + strand, within ECD_02590at 2705.300 kb on - strand, within ECD_02590at 2705.335 kb on + strand, within ECD_02590at 2705.339 kb on + strand, within ECD_02590at 2705.355 kb on + strand, within ECD_02590at 2705.371 kb on + strand, within ECD_02590at 2705.434 kb on + strand, within ECD_02590at 2705.437 kb on + strand, within ECD_02590at 2705.437 kb on + strand, within ECD_02590at 2705.437 kb on + strand, within ECD_02590at 2705.457 kb on - strand, within ECD_02590at 2705.577 kb on + strand, within ECD_02590at 2705.578 kb on - strand, within ECD_02590at 2705.671 kb on + strand, within ECD_02590at 2705.681 kb on + strand, within ECD_02590at 2705.694 kb on + strand, within ECD_02590at 2705.694 kb on + strand, within ECD_02590at 2705.694 kb on + strand, within ECD_02590at 2705.694 kb on + strand, within ECD_02590at 2705.695 kb on - strand, within ECD_02590at 2705.700 kb on + strand, within ECD_02590at 2705.700 kb on + strand, within ECD_02590at 2705.803 kb on + strand, within ECD_02590at 2705.818 kb on + strand, within ECD_02590at 2705.819 kb on - strand, within ECD_02590at 2705.876 kb on - strand, within ECD_02590at 2705.880 kb on + strand, within ECD_02590at 2705.880 kb on + strand, within ECD_02590at 2705.881 kb on - strand, within ECD_02590at 2705.881 kb on - strand, within ECD_02590at 2705.902 kb on + strand, within ECD_02590at 2705.904 kb on + strand, within ECD_02590at 2705.904 kb on + strand, within ECD_02590at 2705.904 kb on + strand, within ECD_02590at 2705.904 kb on + strand, within ECD_02590at 2705.904 kb on + strand, within ECD_02590at 2705.905 kb on - strand, within ECD_02590at 2705.911 kb on - strand, within ECD_02590at 2705.949 kb on + strand, within ECD_02590at 2705.967 kb on + strand, within ECD_02590at 2705.968 kb on - strand, within ECD_02590at 2705.968 kb on - strand, within ECD_02590at 2705.968 kb on - strand, within ECD_02590

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas41
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2,703,221 + ECD_02587 0.73 +0.6
2,703,221 + ECD_02587 0.73 -0.1
2,703,283 + ECD_02587 0.78 +1.0
2,703,284 - ECD_02587 0.78 +0.2
2,703,284 - ECD_02587 0.78 -0.3
2,703,284 - ECD_02587 0.78 -2.8
2,703,312 - ECD_02587 0.80 +1.2
2,703,332 + ECD_02587 0.82 +1.2
2,703,369 + ECD_02587 0.84 +2.7
2,703,398 + ECD_02587 0.87 +0.7
2,703,480 + -0.2
2,703,480 + -0.9
2,703,501 + -0.9
2,703,502 - +0.8
2,703,558 - -0.6
2,703,580 + -0.3
2,703,580 + +0.2
2,703,580 + +0.6
2,703,581 - -0.1
2,703,676 + ECD_02588 0.18 +0.5
2,703,676 + ECD_02588 0.18 +0.1
2,703,772 + ECD_02588 0.33 -0.2
2,703,772 + ECD_02588 0.33 +0.2
2,703,772 + ECD_02588 0.33 +0.6
2,703,773 - ECD_02588 0.33 -0.7
2,703,773 - ECD_02588 0.33 +0.4
2,703,773 - ECD_02588 0.33 +0.6
2,703,839 + ECD_02588 0.44 -0.1
2,703,840 - ECD_02588 0.44 +0.0
2,703,933 + ECD_02588 0.58 +0.2
2,703,933 + ECD_02588 0.58 +0.7
2,703,933 + ECD_02588 0.58 -0.5
2,703,933 + ECD_02588 0.58 -0.9
2,703,933 + ECD_02588 0.58 +0.9
2,703,934 - ECD_02588 0.58 +0.5
2,703,934 - ECD_02588 0.58 +0.1
2,703,934 - ECD_02588 0.58 +0.5
2,703,972 + ECD_02588 0.64 +1.3
2,703,972 + ECD_02588 0.64 +0.2
2,703,973 - ECD_02588 0.64 -0.6
2,703,973 - ECD_02588 0.64 +0.5
2,703,973 - ECD_02588 0.64 +0.2
2,703,973 - ECD_02588 0.64 -0.1
2,704,161 + +0.0
2,704,197 + +1.0
2,704,197 + -0.3
2,704,197 + +0.9
2,704,222 - +0.6
2,704,222 - +0.8
2,704,222 - +0.2
2,704,254 + -0.1
2,704,254 + +0.1
2,704,254 + +1.6
2,704,254 + +0.2
2,704,254 + +0.0
2,704,321 + ECD_02589 0.15 +1.2
2,704,321 + ECD_02589 0.15 +0.6
2,704,321 + ECD_02589 0.15 -0.8
2,704,321 + ECD_02589 0.15 -0.4
2,704,399 - ECD_02589 0.25 -1.3
2,704,401 + ECD_02589 0.25 -0.5
2,704,401 + ECD_02589 0.25 +0.2
2,704,401 + ECD_02589 0.25 +0.6
2,704,401 + ECD_02589 0.25 +0.1
2,704,480 + ECD_02589 0.36 +0.7
2,704,480 + ECD_02589 0.36 +0.2
2,704,480 + ECD_02589 0.36 -0.1
2,704,481 - ECD_02589 0.36 -1.0
2,704,481 - ECD_02589 0.36 -0.0
2,704,565 + ECD_02589 0.46 -0.4
2,704,566 - ECD_02589 0.47 -0.4
2,704,569 + ECD_02589 0.47 -0.1
2,704,569 + ECD_02589 0.47 -0.1
2,704,575 + ECD_02589 0.48 -0.3
2,704,623 - ECD_02589 0.54 -0.3
2,704,625 + ECD_02589 0.54 -0.6
2,704,625 + ECD_02589 0.54 -0.3
2,704,625 + ECD_02589 0.54 -1.8
2,704,625 + ECD_02589 0.54 -0.4
2,704,626 - ECD_02589 0.54 +0.6
2,704,626 - ECD_02589 0.54 +0.5
2,704,626 - ECD_02589 0.54 -1.0
2,704,626 - ECD_02589 0.54 -0.1
2,704,660 + ECD_02589 0.59 +0.2
2,704,660 + ECD_02589 0.59 -1.2
2,704,660 + ECD_02589 0.59 +1.2
2,704,661 - ECD_02589 0.59 -0.6
2,704,661 - ECD_02589 0.59 +0.0
2,704,726 - ECD_02589 0.67 -1.0
2,704,733 + ECD_02589 0.68 -0.4
2,704,737 + ECD_02589 0.69 -0.1
2,704,737 + ECD_02589 0.69 -0.3
2,704,757 + ECD_02589 0.71 +1.2
2,704,757 + ECD_02589 0.71 +0.8
2,704,789 + ECD_02589 0.75 -0.6
2,704,801 + ECD_02589 0.77 -0.6
2,704,802 - ECD_02589 0.77 -0.5
2,704,811 + ECD_02589 0.78 -0.6
2,704,812 - ECD_02589 0.78 -1.0
2,704,826 + ECD_02589 0.80 +0.1
2,704,827 - ECD_02589 0.80 -1.1
2,704,827 - ECD_02589 0.80 -0.5
2,704,827 - ECD_02589 0.80 +1.1
2,704,865 - ECD_02589 0.85 -1.8
2,704,865 - ECD_02589 0.85 +0.6
2,704,926 + +0.5
2,704,926 + +0.3
2,704,927 - +0.8
2,704,927 - +0.1
2,704,978 + -0.6
2,704,994 + +0.2
2,704,998 + +1.8
2,704,998 + +1.8
2,704,998 + -1.2
2,704,998 + +0.4
2,704,998 + -1.0
2,704,999 - -1.6
2,705,005 + +0.8
2,705,006 - -1.4
2,705,011 + -0.2
2,705,011 + -1.8
2,705,011 + -0.5
2,705,011 + -0.5
2,705,011 + -0.6
2,705,011 + +1.2
2,705,011 + -0.8
2,705,011 + -0.1
2,705,011 + +0.6
2,705,011 + -0.4
2,705,011 + +1.1
2,705,011 + +0.2
2,705,011 + -0.4
2,705,011 + -1.0
2,705,011 + +0.0
2,705,011 + -0.1
2,705,011 + -0.2
2,705,011 + +0.9
2,705,011 + +1.2
2,705,011 + +0.5
2,705,011 + +0.0
2,705,011 + -0.3
2,705,011 + +1.2
2,705,012 - -0.9
2,705,012 - +2.1
2,705,012 - -2.0
2,705,012 - +0.2
2,705,012 - +0.5
2,705,012 - -0.1
2,705,025 + -0.8
2,705,025 + -0.2
2,705,025 + -0.8
2,705,037 - +0.5
2,705,041 + -0.0
2,705,042 - +0.7
2,705,045 + +0.8
2,705,046 - +1.2
2,705,046 - -0.2
2,705,046 - +1.0
2,705,046 - +2.1
2,705,046 - +0.6
2,705,046 - +0.6
2,705,047 + +0.9
2,705,080 + -0.0
2,705,080 + +0.1
2,705,080 + +2.6
2,705,080 + +0.2
2,705,080 + -0.5
2,705,080 + +0.4
2,705,080 + -0.1
2,705,088 + +0.8
2,705,088 + -0.4
2,705,088 + -0.3
2,705,109 + +0.2
2,705,109 + +0.7
2,705,145 + +0.5
2,705,145 + +0.1
2,705,145 + +1.0
2,705,145 + -0.4
2,705,146 - +1.4
2,705,146 - -1.6
2,705,181 + -0.0
2,705,181 + -1.0
2,705,200 + +1.0
2,705,267 - ECD_02590 0.15 +0.3
2,705,269 + ECD_02590 0.15 +0.3
2,705,269 + ECD_02590 0.15 +0.6
2,705,269 + ECD_02590 0.15 +0.7
2,705,269 + ECD_02590 0.15 +0.5
2,705,269 + ECD_02590 0.15 +0.1
2,705,269 + ECD_02590 0.15 +0.8
2,705,269 + ECD_02590 0.15 -0.0
2,705,269 + ECD_02590 0.15 +1.1
2,705,269 + ECD_02590 0.15 +1.1
2,705,270 - ECD_02590 0.15 +1.2
2,705,270 - ECD_02590 0.15 -0.2
2,705,270 - ECD_02590 0.15 +0.2
2,705,270 - ECD_02590 0.15 +0.7
2,705,270 - ECD_02590 0.15 -0.4
2,705,299 + ECD_02590 0.17 -0.6
2,705,300 - ECD_02590 0.17 +1.0
2,705,335 + ECD_02590 0.19 +0.9
2,705,339 + ECD_02590 0.20 +1.3
2,705,355 + ECD_02590 0.21 +0.6
2,705,371 + ECD_02590 0.22 +0.6
2,705,434 + ECD_02590 0.27 -0.8
2,705,437 + ECD_02590 0.27 +1.2
2,705,437 + ECD_02590 0.27 -0.1
2,705,437 + ECD_02590 0.27 -1.6
2,705,457 - ECD_02590 0.28 -0.9
2,705,577 + ECD_02590 0.37 +1.1
2,705,578 - ECD_02590 0.37 -0.3
2,705,671 + ECD_02590 0.44 +1.6
2,705,681 + ECD_02590 0.45 +0.9
2,705,694 + ECD_02590 0.46 -0.4
2,705,694 + ECD_02590 0.46 -1.0
2,705,694 + ECD_02590 0.46 +0.6
2,705,694 + ECD_02590 0.46 +0.5
2,705,695 - ECD_02590 0.46 +0.2
2,705,700 + ECD_02590 0.46 +0.8
2,705,700 + ECD_02590 0.46 -0.9
2,705,803 + ECD_02590 0.54 +0.4
2,705,818 + ECD_02590 0.55 -0.3
2,705,819 - ECD_02590 0.55 +0.0
2,705,876 - ECD_02590 0.59 -0.8
2,705,880 + ECD_02590 0.59 -0.9
2,705,880 + ECD_02590 0.59 -0.6
2,705,881 - ECD_02590 0.59 +0.8
2,705,881 - ECD_02590 0.59 -0.1
2,705,902 + ECD_02590 0.61 -0.4
2,705,904 + ECD_02590 0.61 +0.3
2,705,904 + ECD_02590 0.61 +1.0
2,705,904 + ECD_02590 0.61 -0.2
2,705,904 + ECD_02590 0.61 +0.2
2,705,904 + ECD_02590 0.61 -0.2
2,705,905 - ECD_02590 0.61 +1.2
2,705,911 - ECD_02590 0.62 -0.5
2,705,949 + ECD_02590 0.64 -1.4
2,705,967 + ECD_02590 0.66 +1.0
2,705,968 - ECD_02590 0.66 -1.9
2,705,968 - ECD_02590 0.66 +0.1
2,705,968 - ECD_02590 0.66 +0.8

Or see this region's nucleotide sequence