Strain Fitness in Escherichia coli BL21 around ECD_01313

Experiment: Bas31

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01312 and ECD_01313 are separated by 10 nucleotidesECD_01313 and ECD_01314 are separated by 36 nucleotides ECD_01312: ECD_01312 - O-6-alkylguanine-DNA:cysteine-protein methyltransferase, at 1,384,889 to 1,385,404 _01312 ECD_01313: ECD_01313 - p-aminobenzoyl-glutamate transporter; membrane protein, at 1,385,415 to 1,386,941 _01313 ECD_01314: ECD_01314 - p-aminobenzoyl-glutamate hydrolase, B subunit, at 1,386,978 to 1,388,423 _01314 Position (kb) 1385 1386 1387Strain fitness (log2 ratio) -2 -1 0 1at 1384.460 kb on - strandat 1384.460 kb on - strandat 1385.090 kb on + strand, within ECD_01312at 1385.177 kb on - strand, within ECD_01312at 1385.200 kb on - strand, within ECD_01312at 1386.299 kb on - strand, within ECD_01313at 1386.312 kb on + strand, within ECD_01313at 1386.397 kb on - strand, within ECD_01313at 1386.557 kb on + strand, within ECD_01313at 1386.559 kb on + strand, within ECD_01313at 1386.616 kb on - strand, within ECD_01313at 1386.720 kb on + strand, within ECD_01313at 1386.895 kb on + strandat 1387.074 kb on + strandat 1387.151 kb on + strand, within ECD_01314at 1387.151 kb on + strand, within ECD_01314at 1387.184 kb on + strand, within ECD_01314at 1387.184 kb on + strand, within ECD_01314at 1387.189 kb on - strand, within ECD_01314at 1387.742 kb on + strand, within ECD_01314at 1387.742 kb on + strand, within ECD_01314

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas31
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1,384,460 - -0.4
1,384,460 - +0.6
1,385,090 + ECD_01312 0.39 -0.4
1,385,177 - ECD_01312 0.56 +0.8
1,385,200 - ECD_01312 0.60 -2.0
1,386,299 - ECD_01313 0.58 +0.0
1,386,312 + ECD_01313 0.59 -0.9
1,386,397 - ECD_01313 0.64 +0.9
1,386,557 + ECD_01313 0.75 -0.9
1,386,559 + ECD_01313 0.75 -0.1
1,386,616 - ECD_01313 0.79 +0.5
1,386,720 + ECD_01313 0.85 -0.7
1,386,895 + +0.0
1,387,074 + -0.9
1,387,151 + ECD_01314 0.12 -1.1
1,387,151 + ECD_01314 0.12 -0.3
1,387,184 + ECD_01314 0.14 -1.1
1,387,184 + ECD_01314 0.14 +0.1
1,387,189 - ECD_01314 0.15 +0.5
1,387,742 + ECD_01314 0.53 +0.8
1,387,742 + ECD_01314 0.53 -0.1

Or see this region's nucleotide sequence