Strain Fitness in Escherichia coli BL21 around ECD_01655

Experiment: Bas69

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01652 and ECD_01654 are separated by 547 nucleotidesECD_01654 and ECD_01655 are separated by 99 nucleotidesECD_01655 and ECD_01656 overlap by 4 nucleotides ECD_01652: ECD_01652 - component of SufBCD complex, at 1,707,791 to 1,708,801 _01652 ECD_01654: ECD_01654 - uncharacterized protein, at 1,709,349 to 1,709,537 _01654 ECD_01655: ECD_01655 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, at 1,709,637 to 1,710,047 _01655 ECD_01656: ECD_01656 - putative FAD-linked oxidoreductase, at 1,710,044 to 1,713,100 _01656 Position (kb) 1709 1710 1711Strain fitness (log2 ratio) -3 -2 -1 0 1at 1708.643 kb on - strand, within ECD_01652at 1708.651 kb on - strand, within ECD_01652at 1708.655 kb on - strand, within ECD_01652at 1708.673 kb on + strand, within ECD_01652at 1708.804 kb on - strandat 1708.831 kb on + strandat 1708.926 kb on + strandat 1708.927 kb on - strandat 1709.268 kb on + strandat 1709.537 kb on + strandat 1709.833 kb on - strand, within ECD_01655at 1709.833 kb on - strand, within ECD_01655at 1709.833 kb on - strand, within ECD_01655at 1710.475 kb on - strand, within ECD_01656at 1710.703 kb on - strand, within ECD_01656at 1710.706 kb on - strand, within ECD_01656at 1710.945 kb on + strand, within ECD_01656

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas69
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1,708,643 - ECD_01652 0.84 -0.2
1,708,651 - ECD_01652 0.85 +1.1
1,708,655 - ECD_01652 0.85 +0.1
1,708,673 + ECD_01652 0.87 +0.2
1,708,804 - -2.8
1,708,831 + +0.1
1,708,926 + +0.7
1,708,927 - -0.0
1,709,268 + +0.3
1,709,537 + -0.0
1,709,833 - ECD_01655 0.48 +0.7
1,709,833 - ECD_01655 0.48 +0.5
1,709,833 - ECD_01655 0.48 +0.6
1,710,475 - ECD_01656 0.14 +0.6
1,710,703 - ECD_01656 0.22 -1.6
1,710,706 - ECD_01656 0.22 +1.4
1,710,945 + ECD_01656 0.29 -0.8

Or see this region's nucleotide sequence