Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25300
Experiment: plant=Melon; plant sample=MP3; plant location=NA
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | plant=Melon; plant sample=MP3; plant location=NA |
---|---|---|---|---|---|
remove | |||||
4,810,741 | - | -0.8 | |||
4,810,743 | + | -0.2 | |||
4,810,743 | + | -0.1 | |||
4,810,744 | - | -0.7 | |||
4,810,783 | + | -0.1 | |||
4,810,817 | + | +0.5 | |||
4,810,818 | - | +0.6 | |||
4,810,818 | - | -0.1 | |||
4,810,832 | - | -0.1 | |||
4,810,834 | - | -0.2 | |||
4,810,834 | - | -0.4 | |||
4,810,862 | + | -0.6 | |||
4,810,911 | + | +2.3 | |||
4,810,914 | - | -1.7 | |||
4,810,914 | - | +0.2 | |||
4,810,914 | - | +0.4 | |||
4,810,914 | - | +0.3 | |||
4,810,944 | + | -0.1 | |||
4,810,961 | + | -0.1 | |||
4,811,060 | - | +0.0 | |||
4,811,065 | + | +0.3 | |||
4,812,458 | - | -0.3 | |||
4,812,580 | - | -1.5 |
Or see this region's nucleotide sequence