Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24355

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
4,645,234	+				-1.9
4,645,249	+				+0.5
4,645,249	+				-0.3
4,645,283	-				+1.5
4,646,158	+				+0.1
4,646,173	+		LU632_RS24355	0.14	+0.1
4,646,174	-		LU632_RS24355	0.14	-1.1
4,646,174	-		LU632_RS24355	0.14	-1.9
4,646,293	-		LU632_RS24355	0.46	+0.7
4,646,397	+		LU632_RS24355	0.75	-0.0
4,646,397	+		LU632_RS24355	0.75	-2.1
4,646,398	-		LU632_RS24355	0.75	+0.3
4,646,398	-		LU632_RS24355	0.75	-1.0
4,646,398	-		LU632_RS24355	0.75	+0.5
4,646,398	-		LU632_RS24355	0.75	-0.2
4,646,400	+		LU632_RS24355	0.76	+0.0
4,646,401	-		LU632_RS24355	0.76	-0.8
4,646,493	+				-0.3
4,646,494	-				-1.2
4,646,798	-				+0.5