Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24345

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
4,643,420	+		LU632_RS24335	0.34	-0.5
4,643,441	+		LU632_RS24335	0.39	-0.7
4,643,441	+		LU632_RS24335	0.39	-0.2
4,643,441	+		LU632_RS24335	0.39	-0.6
4,643,468	+		LU632_RS24335	0.46	-1.3
4,643,468	+		LU632_RS24335	0.46	+0.3
4,643,529	+		LU632_RS24335	0.60	+0.0
4,643,551	+		LU632_RS24335	0.65	+1.4
4,643,551	+		LU632_RS24335	0.65	+1.3
4,643,866	-		LU632_RS24340	0.17	-1.0
4,644,088	-		LU632_RS24340	0.54	-0.2
4,644,090	+		LU632_RS24340	0.54	-0.1
4,644,702	+		LU632_RS24345	0.80	-1.7
4,644,797	-				-0.8
4,644,801	+				-0.5
4,644,865	+				-1.0
4,644,925	+				-0.4
4,645,016	+				+0.2
4,645,017	-				-0.5
4,645,017	-				+0.1
4,645,089	+				-2.4
4,645,099	+				+0.3
4,645,099	+				+0.5
4,645,105	+				-1.7
4,645,234	+				-1.9
4,645,249	+				+0.5
4,645,249	+				-0.3
4,645,283	-				+1.5