Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23605

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
4,502,803	-		LU632_RS23600	0.47	-0.1
4,502,836	+		LU632_RS23600	0.49	-0.1
4,502,836	+		LU632_RS23600	0.49	+0.9
4,502,837	-		LU632_RS23600	0.49	+0.3
4,502,837	-		LU632_RS23600	0.49	+0.5
4,502,887	+		LU632_RS23600	0.51	-1.1
4,502,896	-		LU632_RS23600	0.52	-0.8
4,502,898	-		LU632_RS23600	0.52	+1.0
4,502,898	-		LU632_RS23600	0.52	-0.3
4,502,974	+		LU632_RS23600	0.56	+0.2
4,502,974	+		LU632_RS23600	0.56	-1.8
4,503,031	+		LU632_RS23600	0.59	+0.0
4,503,436	-		LU632_RS23600	0.81	-1.2
4,503,473	+		LU632_RS23600	0.83	-0.0
4,503,622	+				-0.3
4,503,626	-				-1.2
4,503,626	-				-2.7
4,503,630	-				-0.6
4,503,631	+				-1.1
4,503,631	+				+0.1
4,503,702	+				+1.1
4,503,719	-				-0.4
4,503,799	-				+0.4
4,504,522	+				+0.0
4,504,522	+				-0.5
4,504,560	+				-0.3
4,504,560	+				-0.5
4,504,564	+				+0.3
4,504,564	+				+1.8
4,504,564	+				+1.2
4,504,581	+				+0.2
4,504,582	-				-0.4
4,504,591	+				-0.6
4,504,591	+				-0.3
4,504,591	+				+0.6
4,504,591	+				-0.5
4,504,591	+				+1.3
4,504,591	-				-2.2
4,504,592	-				+1.3
4,504,592	-				+0.5
4,504,593	+				+0.9
4,504,737	-				+0.4
4,504,740	-				-0.1
4,504,740	-				-0.5
4,504,740	-				+0.5
4,504,740	-				+1.2
4,504,741	+				-0.0
4,504,741	+				-1.7
4,504,741	+				-2.0
4,504,741	+				+0.0
4,504,742	-				-0.4
4,504,742	-				+0.7
4,504,745	+				+0.5
4,504,746	-				+2.2
4,504,849	-				+1.0
4,504,849	-				+1.4
4,504,863	-				+1.5
4,504,913	+				+0.6
4,504,992	+				-1.5
4,504,992	+				+0.2
4,505,022	-				-1.4
4,505,022	-				+0.4
4,505,022	-				-0.6
4,505,164	+		LU632_RS23610	0.15	+1.5
4,505,165	-		LU632_RS23610	0.15	-0.6
4,505,497	+		LU632_RS23610	0.49	-1.5
4,505,497	+		LU632_RS23610	0.49	-2.3
4,505,497	+		LU632_RS23610	0.49	+0.9
4,505,497	+		LU632_RS23610	0.49	-0.8