Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17850

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
3,363,909	+		LU632_RS17845	0.70	-1.4
3,363,912	+		LU632_RS17845	0.70	-0.6
3,364,121	-		LU632_RS17845	0.80	+0.3
3,364,596	-				-0.1
3,364,746	+				+0.2
3,364,996	-				+1.7
3,365,238	-		LU632_RS17850	0.14	+0.6
3,365,316	+		LU632_RS17850	0.16	+0.8
3,365,562	+		LU632_RS17850	0.23	+0.3
3,365,585	-		LU632_RS17850	0.24	-0.2
3,365,586	-		LU632_RS17850	0.24	-0.5
3,365,586	-		LU632_RS17850	0.24	+0.0
3,365,586	-		LU632_RS17850	0.24	-1.4
3,365,589	+		LU632_RS17850	0.24	+0.2
3,365,721	+		LU632_RS17850	0.28	+0.0
3,365,919	+		LU632_RS17850	0.34	+0.6
3,366,277	-		LU632_RS17850	0.44	-0.6
3,366,585	-		LU632_RS17850	0.53	-0.5
3,366,785	-		LU632_RS17850	0.58	-0.7
3,368,730	+				-0.2
3,369,162	-				-0.8
3,369,164	-				+0.1
3,369,233	+				-0.8