Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14680
Experiment: plant=Melon; plant sample=MP3; plant location=NA
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | plant=Melon; plant sample=MP3; plant location=NA |
---|---|---|---|---|---|
remove | |||||
2,791,006 | - | LU632_RS14675 | 0.20 | +0.2 | |
2,791,557 | + | LU632_RS14675 | 0.74 | +1.9 | |
2,791,590 | - | LU632_RS14675 | 0.78 | -1.1 | |
2,791,677 | - | LU632_RS14675 | 0.86 | -0.4 | |
2,791,703 | + | LU632_RS14675 | 0.89 | -1.2 | |
2,791,704 | - | LU632_RS14675 | 0.89 | -0.8 | |
2,791,704 | - | LU632_RS14675 | 0.89 | -0.6 | |
2,791,985 | - | LU632_RS14680 | 0.71 | -0.2 | |
2,792,206 | + | -1.0 | |||
2,792,206 | + | +0.1 |
Or see this region's nucleotide sequence